RNA–Protein interactions for RNA: ENST00000489692.1

GGPS1-207, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-207ENST00000489692 C22orf31O95567 290 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 OATP04181 439 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 ATP4AP20648 1035 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 FOSBP53539 338 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 PRKCEQ02156 737 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 SPOUT1Q5T280 376 aaKnown RBP13.17□□□□□ -0.3
GGPS1-207ENST00000489692 EFCAB12Q6NXP0 572 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 NPAS4Q8IUM7 802 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 LRRC71Q8N4P6 559 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 TET1Q8NFU7 2136 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 SLC5A5Q92911 643 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
GGPS1-207ENST00000489692 SEPT9Q9UHD8 586 aaPredicted RBP13.17□□□□□ -0.3
GGPS1-207ENST00000489692 NOC2LQ9Y3T9 749 aaKnown RBP13.17□□□□□ -0.3
GGPS1-207ENST00000489692 RWDD3Q9Y3V2 267 aa13.17□□□□□ -0.3
GGPS1-207ENST00000489692 H3BNC9 293 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 GUCY1B3Q02153 619 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 TBC1D8BQ0IIM8 1120 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 MTERF2Q49AM1 385 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 Q4G0T1 1027 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 TIGD5Q53EQ6 642 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 PIK3AP1Q6ZUJ8 805 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 ZSCAN30Q86W11 494 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 FAM177A1Q8N128 213 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-207ENST00000489692 DAGLBQ8NCG7 672 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 ZNF668Q96K58 619 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-207ENST00000489692 NECAB3Q96P71 396 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-207ENST00000489692 ADAM2Q99965 735 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 C11orf84Q9BUA3 381 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-207ENST00000489692 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 CCDC39Q9UFE4 941 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 ST3GAL5Q9UNP4 418 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
GGPS1-207ENST00000489692 TRIP12Q14669 1992 aaPredicted RBP13.16□□□□□ -0.3
GGPS1-207ENST00000489692 KDM3AQ9Y4C1 1321 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 ZBTB42B2RXF5 422 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 CCNT1O60563 726 aaKnown RBP13.15□□□□□ -0.3
GGPS1-207ENST00000489692 KCNA5P22460 613 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 BMPR1AP36894 532 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 CRYBB1P53674 252 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-207ENST00000489692 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 TYRO3Q06418 890 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 TRIM29Q14134 588 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 UGCGQ16739 394 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 ADALQ6DHV7 355 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 NEK8Q86SG6 692 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 RTN4RL1Q86UN2 441 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-207ENST00000489692 LINC00301Q8NCQ3 95 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 BANK1Q8NDB2 785 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 FAM200AQ8TCP9 573 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 GJB4Q9NTQ9 266 aa13.15□□□□□ -0.3
GGPS1-207ENST00000489692 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
GGPS1-207ENST00000489692 TBKBP1A7MCY6 615 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 ZNF862O60290 1169 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 NR1I2O75469 434 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 PSMD10O75832 226 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 DGKIO75912 1065 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 RB1P06400 928 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 U2AF2P26368 475 aaKnown RBP eCLIP13.14□□□□□ -0.31
GGPS1-207ENST00000489692 SARSP49591 514 aaKnown RBP13.14□□□□□ -0.31
GGPS1-207ENST00000489692 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
GGPS1-207ENST00000489692 STK38Q15208 465 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 RNF169Q8NCN4 708 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 ENGASEQ8NFI3 743 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 RDM1Q8NG50 284 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 TMEM40Q8WWA1 233 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 SH2D3AQ9BRG2 576 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 PHF20Q9BVI0 1012 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 TMX1Q9H3N1 280 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 UBE2ZQ9H832 354 aaPredicted RBP13.14□□□□□ -0.31
GGPS1-207ENST00000489692 ERVK-5Q9HDB9 667 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 C1orf112Q9NSG2 853 aa13.14□□□□□ -0.31
GGPS1-207ENST00000489692 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
GGPS1-207ENST00000489692 DOCK5Q9H7D0 1870 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 SLC37A4O43826 429 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 EDIL3O43854 480 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 KINO60870 393 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 BMP1P13497 986 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 GCFC2P16383 781 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 ZSCAN20P17040 1043 aaPredicted RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 CYP3A7P24462 503 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 KRT2P35908 639 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 GATMP50440 423 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 DNM2P50570 870 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 TCEAL5Q5H9L2 206 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 MOXD1Q6UVY6 613 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 FAM228AQ86W67 206 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 CMTR2Q8IYT2 770 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 OXER1Q8TDS5 423 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 NAP1L4Q99733 375 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 NSUN3Q9H649 340 aaKnown RBP13.13□□□□□ -0.31
GGPS1-207ENST00000489692 ATP6V0A4Q9HBG4 840 aa13.13□□□□□ -0.31
GGPS1-207ENST00000489692 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 274.7 ms