RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 KCNC3Q14003 757 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 TARBP2Q15633 366 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 HERC4Q5GLZ8 1057 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 SUGP1Q8IWZ8 645 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 CKAP2LQ8IYA6 745 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 METTL13Q8N6R0 699 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 ATOH1Q92858 354 aaPredicted RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 SLC5A5Q92911 643 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 UPF3BQ9BZI7 483 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 UNC45AQ9H3U1 944 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 ELAC1Q9H777 363 aaKnown RBP13.3□□□□□ -0.28
ACTN4-206ENST00000489451 TMEM161AQ9NX61 479 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 FAM50BQ9Y247 325 aa13.3□□□□□ -0.28
ACTN4-206ENST00000489451 PSMD10O75832 226 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 TDP2O95551 362 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 FGFR4P22455 802 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 GNA11P29992 359 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 PBX3P40426 434 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 GPC3P51654 580 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 DUSP6Q16828 381 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 CLLU1OSQ5K130 101 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 MCTP2Q6DN12 878 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 CCDC12Q8WUD4 166 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-206ENST00000489451 AIFM3Q96NN9 605 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 LARP6Q9BRS8 491 aaKnown RBP13.29□□□□□ -0.28
ACTN4-206ENST00000489451 TLR9Q9NR96 1032 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 DISC1Q9NRI5 854 aa13.29□□□□□ -0.28
ACTN4-206ENST00000489451 USP15Q9Y4E8 981 aaPredicted RBP13.29□□□□□ -0.28
ACTN4-206ENST00000489451 WDR64B1ANS9 1081 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 LOC730098B7Z3J9 87 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 MAGEB2O15479 319 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 CHMP2AO43633 222 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 CSDE1O75534 798 aaKnown RBP13.28□□□□□ -0.28
ACTN4-206ENST00000489451 UBE3AQ05086 875 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 CBX2Q14781 532 aaPredicted RBP13.28□□□□□ -0.28
ACTN4-206ENST00000489451 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 FAM43BQ6ZT52 329 aaPredicted RBP13.28□□□□□ -0.28
ACTN4-206ENST00000489451 ZNF598Q86UK7 904 aaKnown RBP13.28□□□□□ -0.28
ACTN4-206ENST00000489451 ECHDC2Q86YB7 292 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 TBCKQ8TEA7 893 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 SUSD6Q92537 303 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 RIT2Q99578 217 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 SH2D3AQ9BRG2 576 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 TMEM117Q9H0C3 514 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 ATP6V0A4Q9HBG4 840 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 CEP131Q9UPN4 1083 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 AKT3Q9Y243 479 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 SAMM50Q9Y512 469 aa13.28□□□□□ -0.28
ACTN4-206ENST00000489451 HIDE1A8MVS5 230 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 DTNBO60941 627 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 DARSP14868 501 aaKnown RBP13.27□□□□□ -0.29
ACTN4-206ENST00000489451 EIF4BP23588 611 aaKnown RBP13.27□□□□□ -0.29
ACTN4-206ENST00000489451 USP11P51784 963 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 PLCB3Q01970 1234 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 Q4G0T1 1027 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 RUFY3Q7L099 469 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 CCDC148Q8NFR7 591 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 ETNPPLQ8TBG4 499 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 BICD2Q8TD16 824 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 MRPS27Q92552 414 aaKnown RBP13.27□□□□□ -0.29
ACTN4-206ENST00000489451 FAM167AQ96KS9 214 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 MBOAT7Q96N66 472 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 POP1Q99575 1024 aaKnown RBP13.27□□□□□ -0.29
ACTN4-206ENST00000489451 S1PR5Q9H228 398 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 TLE6Q9H808 572 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 SH3GLB2Q9NR46 395 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 CDH22Q9UJ99 828 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 PCDHB12Q9Y5F1 795 aa13.27□□□□□ -0.29
ACTN4-206ENST00000489451 ZFHX2Q9C0A1 2572 aaPredicted RBP13.27□□□□□ -0.29
ACTN4-206ENST00000489451 CYP3A7-CYP3A51PA0A087WV96 503 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 IGKV6-21A0A0C4DH24 114 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 GAS7O60861 476 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 LAG3P18627 525 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 CYP3A7P24462 503 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 ODR4Q5SWX8 454 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 SPOUT1Q5T280 376 aaKnown RBP13.26□□□□□ -0.29
ACTN4-206ENST00000489451 PLPP4Q5VZY2 271 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 SYCE2Q6PIF2 218 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 TMEM184AQ6ZMB5 413 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 THNSL1Q8IYQ7 743 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 PPP2R3CQ969Q6 453 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 PBXIP1Q96AQ6 731 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 TEKT3Q9BXF9 490 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 NIFKQ9BYG3 293 aaKnown RBP13.26□□□□□ -0.29
ACTN4-206ENST00000489451 PCDHA4Q9UN74 947 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 LZTS1Q9Y250 596 aa13.26□□□□□ -0.29
ACTN4-206ENST00000489451 A0A0U1RQF3 1178 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 MEIS3P2A8K0S8 358 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 SLC37A4O43826 429 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 SFNP31947 248 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 JAK3P52333 1124 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 NLRP5P59047 1200 aa13.25□□□□□ -0.29
ACTN4-206ENST00000489451 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
ACTN4-206ENST00000489451 BMP8AQ7Z5Y6 402 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms