RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 STAG2Q8N3U4 1231 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 TBC1D17Q9HA65 648 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 ERAP1Q9NZ08 941 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 DLGAP2Q9P1A6 1054 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 CDV3Q9UKY7 258 aaKnown RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 CA14Q9ULX7 337 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 DDX19BQ9UMR2 479 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 ADGRG1Q9Y653 693 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
SSBP1-212ENST00000489378 NEDD4P46934 1319 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 FRMPD4Q14CM0 1322 aa10.59□□□□□ -0.71
SSBP1-212ENST00000489378 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 INSRRP14616 1297 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SDHBP21912 280 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 RFX1P22670 979 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 MFSD6Q6ZSS7 791 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 C1orf210Q8IVY1 113 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 MAML2Q8IZL2 1156 aaPredicted RBP10.58□□□□□ -0.72
SSBP1-212ENST00000489378 OTUD7AQ8TE49 926 aaPredicted RBP10.58□□□□□ -0.72
SSBP1-212ENST00000489378 TRAPPC12Q8WVT3 735 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 RSAD2Q8WXG1 361 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 GLG1Q92896 1179 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 ACSF2Q96CM8 615 aaPredicted RBP10.58□□□□□ -0.72
SSBP1-212ENST00000489378 MTMR8Q96EF0 704 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 ZNF558Q96NG5 402 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SENP7Q9BQF6 1050 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 KAT14Q9H8E8 782 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 RGS18Q9NS28 235 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 NCDNQ9UBB6 729 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 WNT16Q9UBV4 365 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 NOC2LQ9Y3T9 749 aaKnown RBP10.58□□□□□ -0.72
SSBP1-212ENST00000489378 C2orf16Q68DN1 1984 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 DENND3A2RUS2 1198 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 ZBTB5O15062 677 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 KINO60870 393 aaKnown RBP10.58□□□□□ -0.72
SSBP1-212ENST00000489378 STAM2O75886 525 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 CA8P35219 290 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 PPM1AP35813 382 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 KRT76Q01546 638 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 KRT17Q04695 432 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SLC35G1Q2M3R5 365 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SLC24A5Q71RS6 500 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 OTOP3Q7RTS5 596 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SAMD3Q8N6K7 520 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SLC22A17Q8WUG5 538 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM40Q8WWA1 233 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 AUTS2Q8WXX7 1259 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 CASD1Q96PB1 797 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 ATP6V0A4Q9HBG4 840 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 C1orf112Q9NSG2 853 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 RNF19AQ9NV58 838 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 DZANK1Q9NVP4 752 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 SPG21Q9NZD8 308 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 GINS2Q9Y248 185 aa10.58□□□□□ -0.72
SSBP1-212ENST00000489378 KDM3AQ9Y4C1 1321 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 CEP295Q9C0D2 2601 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 RRN3P2A6NIE6 340 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 ATP9AO75110 1047 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 CXCL14O95715 111 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 RPLP2P05387 115 aaKnown RBP10.57□□□□□ -0.72
SSBP1-212ENST00000489378 GLULP15104 373 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 LMNB2Q03252 620 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 COL9A3Q14050 684 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM132AQ24JP5 1023 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 CCDC149Q6ZUS6 474 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 GPR149Q86SP6 731 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 SLC39A11Q8N1S5 342 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 ENAHQ8N8S7 591 aaPredicted RBP10.57□□□□□ -0.72
SSBP1-212ENST00000489378 SEPT1Q8WYJ6 367 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 ESR2Q92731 530 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 PCYT2Q99447 389 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 RTKNQ9BST9 563 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM117Q9H0C3 514 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM161AQ9NX61 479 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 ST3GAL5Q9UNP4 418 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 PCDHA2Q9Y5H9 948 aa10.57□□□□□ -0.72
SSBP1-212ENST00000489378 TTC41PQ6P2S7 1318 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 PRR5-ARHGAP8B1AHC4 643 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 KLRF2D3W0D1 207 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 N4BP1O75113 896 aaKnown RBP10.56□□□□□ -0.72
SSBP1-212ENST00000489378 LRRN2O75325 713 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 RPS6KA5O75582 802 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 PCP11498 1178 aaKnown RBP10.56□□□□□ -0.72
SSBP1-212ENST00000489378 KCNA2P16389 499 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 FAM189BP81408 668 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 ARHGAP8P85298 464 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 CABP7Q86V35 215 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 HOMER1Q86YM7 354 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 GPR161Q8N6U8 529 aaKnown RBP10.56□□□□□ -0.72
SSBP1-212ENST00000489378 FAM227BQ96M60 508 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 SMARCAD1Q9H4L7 1026 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 IGSF9Q9P2J2 1179 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 SIT1Q9Y3P8 196 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 ZMYM6O95789 1325 aa10.56□□□□□ -0.72
SSBP1-212ENST00000489378 FRYQ5TBA9 3013 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 DOCK8Q8NF50 2099 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 A0A0D9SFI3 127 aa10.55□□□□□ -0.72
SSBP1-212ENST00000489378 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.55□□□□□ -0.72
SSBP1-212ENST00000489378 NT5C1B-RDH14C9J2C7 533 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms