RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 MCOLN1Q9GZU1 580 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ASCC2Q9H1I8 757 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 METTL14Q9HCE5 456 aaKnown RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 LUC7LQ9NQ29 371 aaKnown RBP9.32□□□□□ -0.92
VTI1A-207ENST00000489357 VAV3Q9UKW4 847 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ODF2LQ9ULJ1 636 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
VTI1A-207ENST00000489357 ATP8B3O60423 1300 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 A0A0G2JMZ2 1700 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 SSU72P8A0A1W2PR75 194 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 ANO9A1A5B4 782 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 SLC16A3O15427 465 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 MSH4O15457 936 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 TADA3O75528 432 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 PSMD10O75832 226 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 LCA5LO95447 670 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 KRT18P05783 430 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 SPATA31C1P0DKV0 1188 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 VCAM1P19320 739 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 ERVK-24P63145 666 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 RBM10P98175 930 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 PABPC4Q13310 644 aaKnown RBP eCLIP9.31□□□□□ -0.924e-7■■■□□ 17.1
VTI1A-207ENST00000489357 ALCAMQ13740 583 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 WHAMMP3Q1A5X7 153 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 USH1GQ495M9 461 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 CEP55Q53EZ4 464 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 FAM83BQ5T0W9 1011 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 GADL1Q6ZQY3 521 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 EPM2AIP1Q7L775 607 aaPredicted RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 KCNK18Q7Z418 384 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 FRMD5Q7Z6J6 570 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 TRIM59Q8IWR1 403 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 GPR161Q8N6U8 529 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 TMEM174Q8WUU8 243 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 RABGGTAQ92696 567 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 ABHD8Q96I13 439 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 P2RX7Q99572 595 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 HSD17B14Q9BPX1 270 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 TIPINQ9BVW5 301 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 KCTD10Q9H3F6 313 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 MRPL44Q9H9J2 332 aaKnown RBP9.31□□□□□ -0.92
VTI1A-207ENST00000489357 TMOD4Q9NZQ9 345 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 MORF4L1Q9UBU8 362 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 CDC23Q9UJX2 597 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 MYO6Q9UM54 1294 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 SIK3Q9Y2K2 1263 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 ZSWIM8A7E2V4 1837 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 PLXNB2O15031 1838 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 FRMPD4Q14CM0 1322 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 RPTORQ8N122 1335 aa9.31□□□□□ -0.92
VTI1A-207ENST00000489357 E9PMD0 336 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MEIS1O00470 390 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 PES1O00541 588 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CETN3O15182 167 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CALUO43852 315 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 FKTNO75072 461 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 TBCAO75347 108 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MED24O75448 989 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CCNYL3P0C7X3 344 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CYP2C8P10632 490 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 H2AFXP16104 143 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CTGFP29279 349 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GCLCP48506 637 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 OAZ1P54368 228 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GOLGA8FQ08AF8 430 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GOLGA8DPQ0D2H9 430 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GIT2Q14161 759 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MYBPC2Q14324 1141 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MTF1Q14872 753 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 EPHA7Q15375 998 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 SPA17Q15506 151 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 ECM1Q16610 540 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 KNOP1Q1ED39 458 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 HERC4Q5GLZ8 1057 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 LRCH2Q5VUJ6 765 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 NCAPH2Q6IBW4 605 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 WDR59Q6PJI9 974 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 B3GNT9Q6UX72 402 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 OTOP1Q7RTM1 612 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CREBRFQ8IUR6 639 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 ANKLE1Q8NAG6 615 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 NEK11Q8NG66 645 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GOLGA5Q8TBA6 731 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 NACC1Q96RE7 527 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 WDR24Q96S15 920 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 PARK7Q99497 189 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 NAPGQ99747 312 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 EIF2AK1Q9BQI3 630 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MKNK1Q9BUB5 465 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 CEP72Q9P209 647 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 RBPJLQ9UBG7 517 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 FBXL5Q9UKA1 691 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 FCF1Q9Y324 198 aaKnown RBP9.3□□□□□ -0.92
VTI1A-207ENST00000489357 MYPNQ86TC9 1320 aa9.3□□□□□ -0.92
VTI1A-207ENST00000489357 GTPBP10A4D1E9 387 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 USO1O60763 962 aaKnown RBP9.29□□□□□ -0.92
VTI1A-207ENST00000489357 CNMDO75829 334 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 LYPLA2O95372 231 aa9.29□□□□□ -0.92
VTI1A-207ENST00000489357 CFBP00751 764 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms