RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 EFHBQ8N7U6 833 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 CLRN3Q8NCR9 226 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 CHST13Q8NET6 341 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 E2F7Q96AV8 911 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 FTSJ1Q9UET6 329 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 ZNF180Q9UJW8 692 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 ASB1Q9Y576 335 aa5.69□□□□□ -1.5
XRN1-213ENST00000489241 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.68□□□□□ -1.5
XRN1-213ENST00000489241 DVL2O14641 736 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 TGM5O43548 720 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 PEX14O75381 377 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 SLC9A1P19634 815 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 IARSP41252 1262 aaKnown RBP5.68□□□□□ -1.5
XRN1-213ENST00000489241 FNTBP49356 437 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 ADCY1Q08828 1119 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 FAPQ12884 760 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 PTPN21Q16825 1174 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 CD276Q5ZPR3 534 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 TMC5Q6UXY8 1006 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 LIMS2Q7Z4I7 341 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 NME9Q86XW9 330 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 CCAR1Q8IX12 1150 aaKnown RBP5.68□□□□□ -1.5
XRN1-213ENST00000489241 HIPK4Q8NE63 616 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 TTC8Q8TAM2 541 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 SLC5A5Q92911 643 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 DVL3Q92997 716 aaPredicted RBP5.68□□□□□ -1.5
XRN1-213ENST00000489241 AHCYL2Q96HN2 611 aaKnown RBP5.68□□□□□ -1.5
XRN1-213ENST00000489241 FUBP3Q96I24 572 aaKnown RBP eCLIP5.68□□□□□ -1.5
XRN1-213ENST00000489241 GBP4Q96PP9 640 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 RHOBTB2Q9BYZ6 727 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 DLL4Q9NR61 685 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 TOMM22Q9NS69 142 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 WASF3Q9UPY6 502 aa5.68□□□□□ -1.5
XRN1-213ENST00000489241 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 FZD9O00144 591 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 MATN3O15232 486 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 PRPF3O43395 683 aaKnown RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 RFPL1O75677 317 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 MYBL2P10244 700 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 ZSCAN20P17040 1043 aaPredicted RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 ATF3P18847 181 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 LSP1P33241 339 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 SESN3P58005 492 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 PFKPQ01813 784 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 SEC23AQ15436 765 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 MAP9Q49MG5 647 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 FAM102BQ5T8I3 360 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 NXNQ6DKJ4 435 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 TRMT10BQ6PF06 316 aaKnown RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 TCEAL8Q8IYN2 117 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 KLHL36Q8N4N3 616 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 WDR48Q8TAF3 677 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 IGDCC4Q8TDY8 1250 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 JPH3Q8WXH2 748 aaPredicted RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 ELF4Q99607 663 aaPredicted RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 PPP4R1LQ9P1A2 415 aa5.67□□□□□ -1.5
XRN1-213ENST00000489241 NOB1Q9ULX3 412 aaKnown RBP5.67□□□□□ -1.5
XRN1-213ENST00000489241 ZNF839A8K0R7 811 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 MT-CO1P00395 513 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 PTGS1P23219 599 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 AOAHP28039 575 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 EPHB4P54760 987 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 KLF1Q13351 362 aaPredicted RBP5.66□□□□□ -1.5
XRN1-213ENST00000489241 MLC1Q15049 377 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 DDB1Q16531 1140 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 BROXQ5VW32 411 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 CCSAPQ6IQ19 270 aaPredicted RBP5.66□□□□□ -1.5
XRN1-213ENST00000489241 FSTL4Q6MZW2 842 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 DPP8Q6V1X1 898 aaPredicted RBP5.66□□□□□ -1.5
XRN1-213ENST00000489241 PROSER1Q86XN7 944 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 CERS3Q8IU89 383 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 KBTBD2Q8IY47 623 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 CALML6Q8TD86 181 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 ASB15Q8WXK1 588 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 ERCC4Q92889 916 aaPredicted RBP5.66□□□□□ -1.5
XRN1-213ENST00000489241 SLC13A1Q9BZW2 595 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 BARX1Q9HBU1 254 aaPredicted RBP5.66□□□□□ -1.5
XRN1-213ENST00000489241 SLC39A2Q9NP94 309 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 C14orf119Q9NWQ9 140 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 RBPJLQ9UBG7 517 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 IP6K2Q9UHH9 426 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 ST6GALNAC2Q9UJ37 374 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 RIPOR2Q9Y4F9 1068 aa5.66□□□□□ -1.5
XRN1-213ENST00000489241 GOLGA6L22H0YM25 854 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 TPD52L2O43399 206 aaKnown RBP5.65□□□□□ -1.5
XRN1-213ENST00000489241 CAND2O75155 1236 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 MMEP08473 750 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 COL6A1P12109 1028 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 CD40P25942 277 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 LRRC32Q14392 662 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 PCBP2Q15366 365 aaKnown RBP eCLIP5.65□□□□□ -1.5
XRN1-213ENST00000489241 EPHA7Q15375 998 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 TERF2Q15554 542 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 SKIDA1Q1XH10 827 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 CATSPEREQ5SY80 951 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 GPR158Q5T848 1215 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 ARHGEF18Q6ZSZ5 1173 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 CIR1Q86X95 450 aaPredicted RBP5.65□□□□□ -1.5
XRN1-213ENST00000489241 MAGEB6Q8N7X4 407 aa5.65□□□□□ -1.5
XRN1-213ENST00000489241 DTX3Q8N9I9 347 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms