RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 LRRC55Q6ZSA7 311 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 TLK2Q86UE8 772 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 TRIM50Q86XT4 487 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 SLC7A3Q8WY07 619 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 CEP63Q96MT8 703 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 SAMSN1Q9NSI8 373 aaKnown RBP14.16□□□□□ -0.14
TOP3A-206ENST00000489131 TYW1Q9NV66 732 aaKnown RBP14.16□□□□□ -0.14
TOP3A-206ENST00000489131 CGNQ9P2M7 1197 aaKnown RBP14.16□□□□□ -0.14
TOP3A-206ENST00000489131 LIMA1Q9UHB6 759 aaKnown RBP14.16□□□□□ -0.14
TOP3A-206ENST00000489131 ZNF215Q9UL58 517 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-206ENST00000489131 PCDHB13Q9Y5F0 798 aa14.16□□□□□ -0.14
TOP3A-206ENST00000489131 ZMYM2Q9UBW7 1377 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 SFI1A8K8P3 1242 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 H0YCG3 227 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 H3BRB1 525 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 HAS3O00219 553 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 SEPT4O43236 478 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 KPNA6O60684 536 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 FKTNO75072 461 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 GCNT3O95395 438 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 FGFR1OPO95684 399 aaKnown RBP14.15□□□□□ -0.14
TOP3A-206ENST00000489131 MYBP10242 640 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 PTGS1P23219 599 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 NPTX2P47972 431 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 MARSP56192 900 aaKnown RBP14.15□□□□□ -0.14
TOP3A-206ENST00000489131 GJA9P57773 515 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 HTRA3P83110 453 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 FANCCQ00597 558 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 MAP2K1Q02750 393 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-206ENST00000489131 DMP1Q13316 513 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-206ENST00000489131 MYBPC2Q14324 1141 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 PPP2R5AQ15172 486 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 LRRC41Q15345 812 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 FAM114A1Q8IWE2 563 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 CSGALNACT2Q8N6G5 542 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 CD99L2Q8TCZ2 262 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 CTAGE1Q96RT6 745 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 TSG101Q99816 390 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 SH2D3AQ9BRG2 576 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 ZHX3Q9H4I2 956 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 TUT1Q9H6E5 874 aaKnown RBP14.15□□□□□ -0.14
TOP3A-206ENST00000489131 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 TBC1D7Q9P0N9 293 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 ARHGAP28Q9P2N2 729 aa14.15□□□□□ -0.14
TOP3A-206ENST00000489131 A0A1B0GTH6 734 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TGFB1I1O43294 461 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 HMGCRP04035 888 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 NMT1P30419 496 aaKnown RBP14.14□□□□□ -0.15
TOP3A-206ENST00000489131 NAMPTP43490 491 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 SMTNP53814 917 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 FKBP3Q00688 224 aaKnown RBP14.14□□□□□ -0.15
TOP3A-206ENST00000489131 BRDTQ58F21 947 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TCP11X2Q5H9J9 407 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 FAM102BQ5T8I3 360 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 IER5Q5VY09 327 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 SLC9A9Q8IVB4 645 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 C12orf56Q8IXR9 622 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 LINC01465Q8N7H1 131 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TMEM161BQ8NDZ6 487 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 GOLGA5Q8TBA6 731 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TCP11Q8WWU5 503 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TRIM5Q9C035 493 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 RNPEPQ9H4A4 650 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 TMEM206Q9H813 350 aa14.14□□□□□ -0.15
TOP3A-206ENST00000489131 MAGEB2O15479 319 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 DYNC1LI2O43237 492 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 CBFA2T2O43439 604 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 C22orf31O95567 290 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 GNA14O95837 355 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 CST5P28325 142 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 HOXC8P31273 242 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 MCCD1P59942 119 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 POU5F1BQ06416 359 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 CACNB2Q08289 660 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 TBC1D8BQ0IIM8 1120 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 TPD52L1Q16890 204 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 HAUS6Q7Z4H7 955 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 MAP4K3Q8IVH8 894 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 ZNF296Q8WUU4 475 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 BSNDQ8WZ55 320 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 KAT2BQ92831 832 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 IFT74Q96LB3 600 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 SRRTQ9BXP5 876 aaKnown RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 AP5M1Q9H0R1 490 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 POLR3FQ9H1D9 316 aaPredicted RBP14.13□□□□□ -0.15
TOP3A-206ENST00000489131 PHLPP2Q6ZVD8 1323 aa14.13□□□□□ -0.15
TOP3A-206ENST00000489131 KCNJ18B7U540 433 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 K7ENM7 598 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 CALUO43852 315 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-206ENST00000489131 PRPF6O94906 941 aaKnown RBP14.12□□□□□ -0.15
TOP3A-206ENST00000489131 PRKCSHP14314 528 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-206ENST00000489131 INSRRP14616 1297 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 GLRA2P23416 452 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 MARK3P27448 753 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 PEX3P56589 373 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 MKRN4PQ13434 485 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-206ENST00000489131 KCNJ12Q14500 433 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 MXD4Q14582 209 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-206ENST00000489131 NR1I3Q14994 352 aa14.12□□□□□ -0.15
TOP3A-206ENST00000489131 FSCN1Q16658 493 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms