RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 KCNA5P22460 613 aa25.83■■□□□ 1.73
COL9A3-213ENST00000489045 NLRP7Q8WX94 980 aa25.83■■□□□ 1.73
COL9A3-213ENST00000489045 P2RX5Q93086 422 aa25.83■■□□□ 1.73
COL9A3-213ENST00000489045 ALG13Q9NP73 1137 aaKnown RBP25.83■■□□□ 1.73
COL9A3-213ENST00000489045 MARCH6O60337 910 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 CSPG5O95196 566 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 MMP1P03956 469 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 DARSP14868 501 aaKnown RBP25.82■■□□□ 1.72
COL9A3-213ENST00000489045 QARSP47897 775 aaKnown RBP25.82■■□□□ 1.72
COL9A3-213ENST00000489045 FAM102BQ5T8I3 360 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 PLA2G4FQ68DD2 849 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 ANO5Q75V66 913 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 TMEM161AQ9NX61 479 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 PLAGL2Q9UPG8 496 aa25.82■■□□□ 1.72
COL9A3-213ENST00000489045 IGKV6-21A0A0C4DH24 114 aa25.81■■□□□ 1.72
COL9A3-213ENST00000489045 TBKBP1A7MCY6 615 aa25.81■■□□□ 1.72
COL9A3-213ENST00000489045 BTBD18B2RXH4 712 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 ITGB1P05556 798 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 FGFR1P11362 822 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 ZSCAN20P17040 1043 aaPredicted RBP25.8■■□□□ 1.72
COL9A3-213ENST00000489045 FGFR4P22455 802 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 DNM2P50570 870 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 FAM189BP81408 668 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 TRIM29Q14134 588 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 LEXMQ3ZCV2 418 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 NAALADL2Q58DX5 795 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 DIS3L2Q8IYB7 885 aaKnown RBP25.8■■□□□ 1.72
COL9A3-213ENST00000489045 KLHL23Q8NBE8 558 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 ELAC1Q9H777 363 aaKnown RBP25.8■■□□□ 1.72
COL9A3-213ENST00000489045 ATP6V0A4Q9HBG4 840 aa25.8■■□□□ 1.72
COL9A3-213ENST00000489045 WRAP73Q9P2S5 460 aaPredicted RBP25.8■■□□□ 1.72
COL9A3-213ENST00000489045 DKC1O60832 514 aaKnown RBP eCLIP25.79■■□□□ 1.72
COL9A3-213ENST00000489045 MAFO75444 373 aaPredicted RBP25.79■■□□□ 1.72
COL9A3-213ENST00000489045 BAG4O95429 457 aaKnown RBP25.79■■□□□ 1.72
COL9A3-213ENST00000489045 P4HBP07237 508 aaKnown RBP25.79■■□□□ 1.72
COL9A3-213ENST00000489045 NCAPH2Q6IBW4 605 aa25.79■■□□□ 1.72
COL9A3-213ENST00000489045 SLFN12Q8IYM2 578 aa25.79■■□□□ 1.72
COL9A3-213ENST00000489045 PABPC5Q96DU9 382 aaKnown RBP25.79■■□□□ 1.72
COL9A3-213ENST00000489045 CYP26B1Q9NR63 512 aa25.79■■□□□ 1.72
COL9A3-213ENST00000489045 CSDE1O75534 798 aaKnown RBP25.78■■□□□ 1.72
COL9A3-213ENST00000489045 DNAJB1P25685 340 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 NPEPPSP55786 919 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 SPIRE1Q08AE8 756 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 CAMK1Q14012 370 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 COL19A1Q14993 1142 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 EPHA7Q15375 998 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 SPOUT1Q5T280 376 aaKnown RBP25.78■■□□□ 1.72
COL9A3-213ENST00000489045 EP400NLQ6ZTU2 488 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.78■■□□□ 1.72
COL9A3-213ENST00000489045 SPPL3Q8TCT6 385 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 LXNQ9BS40 222 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 GCOM2Q9BZD3 368 aaPredicted RBP25.78■■□□□ 1.72
COL9A3-213ENST00000489045 SUCLA2Q9P2R7 463 aaPredicted RBP25.78■■□□□ 1.72
COL9A3-213ENST00000489045 HCSTQ9UBK5 93 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 LIMCH1Q9UPQ0 1083 aa25.78■■□□□ 1.72
COL9A3-213ENST00000489045 A0A087WZ62 844 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 H3BQ06 376 aaPredicted RBP25.77■■□□□ 1.72
COL9A3-213ENST00000489045 CDC42EP1Q00587 391 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 C8orf34Q49A92 452 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 RHPN2Q8IUC4 686 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 CCDC83Q8IWF9 413 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 NEK9Q8TD19 979 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 DYDC2Q96IM9 177 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 JPH2Q9BR39 696 aaPredicted RBP25.77■■□□□ 1.72
COL9A3-213ENST00000489045 FDXACB1Q9BRP7 624 aaPredicted RBP25.77■■□□□ 1.72
COL9A3-213ENST00000489045 CLDND1Q9NY35 253 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 RGL1Q9NZL6 768 aa25.77■■□□□ 1.72
COL9A3-213ENST00000489045 WNT7AO00755 349 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 HYAL1Q12794 435 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 ZNF410Q86VK4 478 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 ECHDC2Q86YB7 292 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 C4orf19Q8IY42 314 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 ZNF579Q8NAF0 562 aaKnown RBP25.76■■□□□ 1.71
COL9A3-213ENST00000489045 POF1BQ8WVV4 589 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 CEP170P1Q96L14 293 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 RNF19AQ9NV58 838 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 TYW1Q9NV66 732 aaKnown RBP25.76■■□□□ 1.71
COL9A3-213ENST00000489045 PCDHB12Q9Y5F1 795 aa25.76■■□□□ 1.71
COL9A3-213ENST00000489045 CYP4A11Q02928 519 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 CALCRLQ16602 461 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 PTCRAQ6ISU1 281 aaPredicted RBP25.75■■□□□ 1.71
COL9A3-213ENST00000489045 KSR1Q8IVT5 923 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 SLC7A3Q8WY07 619 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 NLRP4Q96MN2 994 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 TMEM117Q9H0C3 514 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 AAASQ9NRG9 546 aa25.75■■□□□ 1.71
COL9A3-213ENST00000489045 HOXA2O43364 376 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 SFPQP23246 707 aaKnown RBP eCLIP25.74■■□□□ 1.71
COL9A3-213ENST00000489045 YWHABP31946 246 aaKnown RBP25.74■■□□□ 1.71
COL9A3-213ENST00000489045 POLGP54098 1239 aaPredicted RBP25.74■■□□□ 1.71
COL9A3-213ENST00000489045 GUCY1B3Q02153 619 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 CTTNQ14247 550 aaKnown RBP25.74■■□□□ 1.71
COL9A3-213ENST00000489045 COLGALT1Q8NBJ5 622 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 RNF169Q8NCN4 708 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 CASD1Q96PB1 797 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 CWH43Q9H720 699 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 BMP2KQ9NSY1 1161 aaPredicted RBP25.74■■□□□ 1.71
COL9A3-213ENST00000489045 PPME1Q9Y570 386 aa25.74■■□□□ 1.71
COL9A3-213ENST00000489045 NCK2O43639 380 aa25.73■■□□□ 1.71
COL9A3-213ENST00000489045 NEMFO60524 1076 aa25.73■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms