RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 MTHFD1LQ6UB35 978 aa17.72■□□□□ 0.43
CLDN11-208ENST00000488989 TRAPPC12Q8WVT3 735 aa17.72■□□□□ 0.43
CLDN11-208ENST00000488989 TCP11Q8WWU5 503 aa17.72■□□□□ 0.43
CLDN11-208ENST00000488989 NTPCRQ9BSD7 190 aaKnown RBP17.72■□□□□ 0.43
CLDN11-208ENST00000488989 RNF208Q9H0X6 261 aa17.72■□□□□ 0.43
CLDN11-208ENST00000488989 KCNG1Q9UIX4 513 aa17.72■□□□□ 0.43
CLDN11-208ENST00000488989 SFI1A8K8P3 1242 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 PPP1R3GB7ZBB8 358 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 MKRN4PQ13434 485 aaPredicted RBP17.71■□□□□ 0.43
CLDN11-208ENST00000488989 ANO6Q4KMQ2 910 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 C11orf57Q6ZUT1 292 aaPredicted RBP17.71■□□□□ 0.43
CLDN11-208ENST00000488989 MAEAQ7L5Y9 396 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 EPM2AIP1Q7L775 607 aaPredicted RBP17.71■□□□□ 0.43
CLDN11-208ENST00000488989 MYCT1Q8N699 235 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 LMBR1Q8WVP7 490 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 SPIRE2Q8WWL2 714 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 HPS3Q969F9 1004 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 BPIFA3Q9BQP9 254 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 STRA6Q9BX79 667 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 CRISPLD2Q9H0B8 497 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 POLR3FQ9H1D9 316 aaPredicted RBP17.71■□□□□ 0.43
CLDN11-208ENST00000488989 ST6GALNAC4Q9H4F1 302 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 ZHX3Q9H4I2 956 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 POLD4Q9HCU8 107 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 SLC39A2Q9NP94 309 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 DACH1Q9UI36 760 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 PHF24Q9UPV7 400 aa17.71■□□□□ 0.43
CLDN11-208ENST00000488989 DNM1LO00429 736 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 CD44P16070 742 aaKnown RBP17.7■□□□□ 0.42
CLDN11-208ENST00000488989 PRCPP42785 496 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 NCKAP1LP55160 1127 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 SOX10P56693 466 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 IGBP1P78318 339 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 HIC1Q14526 733 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 NBPF20Q3BBV1 942 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 ODR4Q5SWX8 454 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 EFCAB12Q6NXP0 572 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 NFRKBQ6P4R8 1299 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 GAS2L3Q86XJ1 694 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 FAM178BQ8IXR5 827 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 SMYD4Q8IYR2 804 aaPredicted RBP17.7■□□□□ 0.42
CLDN11-208ENST00000488989 ADSSL1Q8N142 457 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 GUF1Q8N442 669 aaKnown RBP17.7■□□□□ 0.42
CLDN11-208ENST00000488989 SLC17A8Q8NDX2 589 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 BSNDQ8WZ55 320 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 TMEM143Q96AN5 459 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 DEFB118Q96PH6 123 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 DNAJC25Q9H1X3 360 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 GTF2IRD1Q9UHL9 959 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 GRIN2DO15399 1336 aa17.7■□□□□ 0.42
CLDN11-208ENST00000488989 C17orf102A2RUQ5 167 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 EIF3DO15371 548 aaKnown RBP eCLIP17.69■□□□□ 0.42
CLDN11-208ENST00000488989 PPP1R37O75864 691 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 GJB1P08034 283 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 GNAT1P11488 350 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 GLRA2P23416 452 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 ERCC5P28715 1186 aaPredicted RBP17.69■□□□□ 0.42
CLDN11-208ENST00000488989 NAMPTP43490 491 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 PTPN11Q06124 597 aaPredicted RBP17.69■□□□□ 0.42
CLDN11-208ENST00000488989 DRP2Q13474 957 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 ALCAMQ13740 583 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 PPP2R5AQ15172 486 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 BMT2Q1RMZ1 405 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 ZNF720Q7Z2F6 126 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 C7orf31Q8N865 590 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 GLIS3Q8NEA6 775 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 ASAP3Q8TDY4 903 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 PSPC1Q8WXF1 523 aaKnown RBP17.69■□□□□ 0.42
CLDN11-208ENST00000488989 IFT74Q96LB3 600 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 FGFBP2Q9BYJ0 223 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 UBE4BO95155 1302 aa17.69■□□□□ 0.42
CLDN11-208ENST00000488989 SMIM35A0A1B0GVV1 85 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 KBTBD13C9JR72 458 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 ASAP2O43150 1006 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 SGPL1O95470 568 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 CAPN2P17655 700 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 SCP2P22307 547 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 TMOD1P28289 359 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 NPTX2P47972 431 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 DNM2P50570 870 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 PEX3P56589 373 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 POU5F1BQ06416 359 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 DMP1Q13316 513 aaPredicted RBP17.68■□□□□ 0.42
CLDN11-208ENST00000488989 STIM1Q13586 685 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 MXD4Q14582 209 aaPredicted RBP17.68■□□□□ 0.42
CLDN11-208ENST00000488989 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 LRRC71Q8N4P6 559 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 SLC43A3Q8NBI5 491 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 ZNF507Q8TCN5 953 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 SCFD1Q8WVM8 642 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 DHTKD1Q96HY7 919 aaPredicted RBP17.68■□□□□ 0.42
CLDN11-208ENST00000488989 GLT1D1Q96MS3 346 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
CLDN11-208ENST00000488989 MRPL44Q9H9J2 332 aaKnown RBP17.68■□□□□ 0.42
CLDN11-208ENST00000488989 SUGCTQ9HAC7 445 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 TBC1D7Q9P0N9 293 aa17.68■□□□□ 0.42
CLDN11-208ENST00000488989 A0A1W2PQ45 241 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms