RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 ZBTB39O15060 712 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 ATP1A1P05023 1023 aaKnown RBP14.6□□□□□ -0.07
CHD1L-208ENST00000488864 HSPA6P17066 643 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 ICAM3P32942 547 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 AARSP49588 968 aaKnown RBP eCLIP14.6□□□□□ -0.07
CHD1L-208ENST00000488864 MORC4Q8TE76 937 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 ACBD3Q9H3P7 528 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 SLC5A4Q9NY91 659 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 EPN1Q9Y6I3 576 aaPredicted RBP14.6□□□□□ -0.07
CHD1L-208ENST00000488864 LRRC10BA6NIK2 292 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 SLITRK3O94933 977 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 TUBBP07437 444 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 RPA1P27694 616 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 C1QTNF8P60827 252 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 GSPT2Q8IYD1 628 aaKnown RBP14.6□□□□□ -0.07
CHD1L-208ENST00000488864 PIGOQ8TEQ8 1089 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 USP6NLQ92738 828 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 HSD17B14Q9BPX1 270 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 VIPAS39Q9H9C1 493 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 BLOC1S4Q9NUP1 217 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 SLC9A2Q9UBY0 812 aa14.6□□□□□ -0.07
CHD1L-208ENST00000488864 DNAH12Q6ZR08 3092 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 PPFIA4O75335 1185 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 NDUFA10O95299 355 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 GGPS1O95749 300 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 SSBP05455 408 aaKnown RBP eCLIP14.59□□□□□ -0.07
CHD1L-208ENST00000488864 TXNP10599 105 aaKnown RBP14.59□□□□□ -0.07
CHD1L-208ENST00000488864 RGS2P41220 211 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 ADCYAP1R1P41586 468 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 FLT3LGP49771 235 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 PRKCZQ05513 592 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 ICE2Q659A1 982 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 MAMDC4Q6UXC1 1216 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 ZNF467Q7Z7K2 595 aaPredicted RBP14.59□□□□□ -0.07
CHD1L-208ENST00000488864 CD99L2Q8TCZ2 262 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 CAPZA3Q96KX2 299 aa14.59□□□□□ -0.07
CHD1L-208ENST00000488864 DIS3Q9Y2L1 958 aaKnown RBP14.59□□□□□ -0.07
CHD1L-208ENST00000488864 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.58□□□□□ -0.07
CHD1L-208ENST00000488864 KCNJ18B7U540 433 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 KCNJ12Q14500 433 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 EPHA7Q15375 998 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 TMEM119Q4V9L6 283 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 TCP11X2Q5H9J9 407 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 TAPT1Q6NXT6 567 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 SOCS4Q8WXH5 440 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 LXNQ9BS40 222 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 MAPK8IP1Q9UQF2 711 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 LRRC37A2A6NM11 1700 aa14.58□□□□□ -0.07
CHD1L-208ENST00000488864 WDR64B1ANS9 1081 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 GPR25O00155 361 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 FARP2O94887 1054 aaPredicted RBP14.58□□□□□ -0.08
CHD1L-208ENST00000488864 MYBL2P10244 700 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 GTF2A1P52655 376 aaPredicted RBP14.58□□□□□ -0.08
CHD1L-208ENST00000488864 KRT76Q01546 638 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 UGCGQ16739 394 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 LARP4BQ92615 738 aaKnown RBP14.58□□□□□ -0.08
CHD1L-208ENST00000488864 APBA2Q99767 749 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 SENP7Q9BQF6 1050 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 SH2D3AQ9BRG2 576 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 KATNBL1Q9H079 304 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 MLXIPQ9HAP2 919 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 KDM3AQ9Y4C1 1321 aa14.58□□□□□ -0.08
CHD1L-208ENST00000488864 HOXC6P09630 235 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 TGFB3P10600 412 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 GGCXP38435 758 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 ACTR2P61160 394 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 UBXN1Q04323 297 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 ACVR2BQ13705 512 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 TTLL4Q14679 1199 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 KIF22Q14807 665 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 CCDC62Q6P9F0 684 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 SCFD2Q8WU76 684 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 NELFBQ8WX92 580 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 PYM1Q9BRP8 204 aaKnown RBP14.57□□□□□ -0.08
CHD1L-208ENST00000488864 NT5C3AQ9H0P0 336 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 RWDD2AQ9UIY3 292 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 NFASCO94856 1347 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 TTC26A0AVF1 554 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 TMEM150BA6NC51 233 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 AGPSO00116 658 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 STIM1Q13586 685 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 HSDL1Q3SXM5 330 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 HYIQ5T013 277 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 ZNF746Q6NUN9 644 aaPredicted RBP14.57□□□□□ -0.08
CHD1L-208ENST00000488864 RAD54LQ92698 747 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 HINFPQ9BQA5 517 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 POLR3CQ9BUI4 534 aaPredicted RBP14.57□□□□□ -0.08
CHD1L-208ENST00000488864 ABHD16BQ9H3Z7 469 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 JRKLQ9Y4A0 524 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 PCDHA10Q9Y5I2 948 aa14.57□□□□□ -0.08
CHD1L-208ENST00000488864 LOC102724159A0A0B4J2E5 919 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 NEDD9Q14511 834 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 PWP2Q15269 919 aaKnown RBP14.56□□□□□ -0.08
CHD1L-208ENST00000488864 SWSAP1Q6NVH7 229 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 DYMQ7RTS9 669 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 COG1Q8WTW3 980 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 PPM1EQ8WY54 764 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 CFHR5Q9BXR6 569 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 BHMT2Q9H2M3 363 aa14.56□□□□□ -0.08
CHD1L-208ENST00000488864 VTA1Q9NP79 307 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms