RNA–Protein interactions for RNA: ENST00000488828.1

NUP98-212, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 712 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-212ENST00000488828 CCT6AP40227 531 aaKnown RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 FXR1P51114 621 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP98-212ENST00000488828 POLGP54098 1239 aaPredicted RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 CEBPZQ03701 1054 aaKnown RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 BECN1Q14457 450 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 PDIA5Q14554 519 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 GPNMBQ14956 572 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 KIZQ2M2Z5 673 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 FAM26DQ5JW98 314 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 TRAF7Q6Q0C0 670 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 ADGRD1Q6QNK2 874 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 EXOC8Q8IYI6 725 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 C4orf32Q8N8J7 132 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 SLC7A3Q8WY07 619 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 ZNF668Q96K58 619 aaPredicted RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 HSD17B14Q9BPX1 270 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 JPH2Q9BR39 696 aaPredicted RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 IFIH1Q9BYX4 1025 aaKnown RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 CYP26B1Q9NR63 512 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.32□□□□□ -0.44
NUP98-212ENST00000488828 MSRAQ9UJ68 235 aa12.32□□□□□ -0.44
NUP98-212ENST00000488828 MYH9P35579 1960 aaKnown RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 VWA3AA6NCI4 1184 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 EFCAB14O75071 495 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 BAIAP3O94812 1187 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 STBD1O95210 358 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 NLRP11P59045 1033 aaKnown RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 NFX1Q12986 1120 aaKnown RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 LPIN1Q14693 890 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 TARBP2Q15633 366 aaKnown RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 PLEKHG4Q58EX7 1191 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 KRT79Q5XKE5 535 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 FAM117BQ6P1L5 589 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 PIGOQ8TEQ8 1089 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 NLRP7Q8WX94 980 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 VWCEQ96DN2 955 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 NACC1Q96RE7 527 aa12.31□□□□□ -0.44
NUP98-212ENST00000488828 SUCLA2Q9P2R7 463 aaPredicted RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 WRAP73Q9P2S5 460 aaPredicted RBP12.31□□□□□ -0.44
NUP98-212ENST00000488828 TK2O00142 265 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 RPS6KA5O75582 802 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 UPP2O95045 317 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 AMHP03971 560 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 CD52P31358 61 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 RFC5P40937 340 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 PRPHP41219 470 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 RABGGTBP53611 331 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 CRYBB1P53674 252 aaPredicted RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 SMAD3P84022 425 aaKnown RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 PAK2Q13177 524 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 FBXO47Q5MNV8 452 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 HAUS3Q68CZ6 603 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 FAM109BQ6ICB4 259 aaPredicted RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 FAM173BQ6P4H8 233 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 TSHZ1Q6ZSZ6 1077 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 RHPN2Q8IUC4 686 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 USP38Q8NB14 1042 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 SNX29Q8TEQ0 813 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 APBB2Q92870 758 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 OSMRQ99650 979 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 POLR3CQ9BUI4 534 aaPredicted RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 OSBPL7Q9BZF2 842 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 ZSCAN16Q9H4T2 348 aaPredicted RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 TUFT1Q9NNX1 390 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 ANKEF1Q9NU02 776 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 MTMR6Q9Y217 621 aa12.3□□□□□ -0.44
NUP98-212ENST00000488828 RANBP2P49792 3224 aaKnown RBP12.3□□□□□ -0.44
NUP98-212ENST00000488828 SCN5AQ14524 2016 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 MED24O75448 989 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 BMP15O95972 392 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 SRGAP2CP0DJJ0 459 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 SPATA31C1P0DKV0 1188 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 XRCC6P12956 609 aaKnown RBP eCLIP12.29□□□□□ -0.44
NUP98-212ENST00000488828 PDIA4P13667 645 aaKnown RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 RPA1P27694 616 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 CDC25AP30304 524 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 WDR5P61964 334 aaKnown RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 ATP2C1P98194 919 aaPredicted RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 CDC42EP1Q00587 391 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 MGAT3Q09327 533 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 TCTN1Q2MV58 587 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 FOXD4L6Q3SYB3 417 aaPredicted RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 ODR4Q5SWX8 454 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 RASIP1Q5U651 963 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 FOXD4L3Q6VB84 417 aaPredicted RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 TMCO2Q7Z6W1 182 aaPredicted RBP12.29□□□□□ -0.44
NUP98-212ENST00000488828 MYOCDQ8IZQ8 938 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 RASSF8Q8NHQ8 419 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 TMEM143Q96AN5 459 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 CDK5RAP3Q96JB5 506 aa12.29□□□□□ -0.44
NUP98-212ENST00000488828 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms