RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 UPP2O95045 317 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 CA3P07451 260 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 SPATA31C1P0DKV0 1188 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 DARSP14868 501 aaKnown RBP14.35□□□□□ -0.11
PHF1-210ENST00000488767 RARRES1P49788 294 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 TCTN1Q2MV58 587 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 POTEGQ6S5H5 508 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 MCPH1Q8NEM0 835 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 PIGOQ8TEQ8 1089 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 TOP1MTQ969P6 601 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 TMEM143Q96AN5 459 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 AK8Q96MA6 479 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 CEP89Q96ST8 783 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 ADAMTS10Q9H324 1103 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
PHF1-210ENST00000488767 MTMR10Q9NXD2 777 aa14.35□□□□□ -0.11
PHF1-210ENST00000488767 LAMA2P24043 3122 aaKnown RBP14.35□□□□□ -0.11
PHF1-210ENST00000488767 A0A087WZ62 844 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 ENPP3O14638 875 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 USO1O60763 962 aaKnown RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 PHKA2P46019 1235 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 NCBP1Q09161 790 aaKnown RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 ZRSR1Q15695 479 aaKnown RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 TMEM40Q8WWA1 233 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 GAS2L1Q99501 681 aaPredicted RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 FDXACB1Q9BRP7 624 aaPredicted RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 OSBPL7Q9BZF2 842 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 TSPYL2Q9H2G4 693 aaPredicted RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 CDHR5Q9HBB8 845 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 ERVK-5Q9HDB9 667 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 DACT1Q9NYF0 836 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 KIAA1024Q9UPX6 916 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 DNM3Q9UQ16 869 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 MTMR6Q9Y217 621 aa14.34□□□□□ -0.11
PHF1-210ENST00000488767 YBX2Q9Y2T7 364 aaKnown RBP14.34□□□□□ -0.11
PHF1-210ENST00000488767 TET1Q8NFU7 2136 aa14.33□□□□□ -0.11
PHF1-210ENST00000488767 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 ZBTB39O15060 712 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 SLC34A2O95436 690 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 SRGAP2CP0DJJ0 459 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 MYOGP15173 224 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 LAMTOR4Q0VGL1 99 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 MKRN4PQ13434 485 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 DRP2Q13474 957 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 SF3A1Q15459 793 aaKnown RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 SLC24A5Q71RS6 500 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 TMCO2Q7Z6W1 182 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 FAM228AQ86W67 206 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 NPAS4Q8IUM7 802 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 ZNF579Q8NAF0 562 aaKnown RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 CALML4Q96GE6 196 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 ZNF668Q96K58 619 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 ADAM2Q99965 735 aa14.33□□□□□ -0.12
PHF1-210ENST00000488767 TTYH1Q9H313 450 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 DDX19AQ9NUU7 478 aaKnown RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 MORC2Q9Y6X9 1032 aaPredicted RBP14.33□□□□□ -0.12
PHF1-210ENST00000488767 SZT2Q5T011 3432 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 SLC26A4O43511 780 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 IBSPP21815 317 aaPredicted RBP14.32□□□□□ -0.12
PHF1-210ENST00000488767 LONP1P36776 959 aaKnown RBP14.32□□□□□ -0.12
PHF1-210ENST00000488767 TXLNAP40222 546 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 UBA7P41226 1012 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 SARSP49591 514 aaKnown RBP14.32□□□□□ -0.12
PHF1-210ENST00000488767 RESTQ13127 1097 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 PCBP1Q15365 356 aaKnown RBP eCLIP14.32□□□□□ -0.12
PHF1-210ENST00000488767 CATSPER4Q7RTX7 472 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 RNF149Q8NC42 400 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 SPRYD3Q8NCJ5 442 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
PHF1-210ENST00000488767 CHST12Q9NRB3 414 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 RGS18Q9NS28 235 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 PCDHB7Q9Y5E2 793 aa14.32□□□□□ -0.12
PHF1-210ENST00000488767 HOXA2O43364 376 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 ERLIN2O94905 339 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 SKIP12755 728 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 FOSL2P15408 326 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 HTRA4P83105 476 aaPredicted RBP14.31□□□□□ -0.12
PHF1-210ENST00000488767 PPP2R5AQ15172 486 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 FAM102BQ5T8I3 360 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 PADI6Q6TGC4 694 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 KSR1Q8IVT5 923 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 SAMD11Q96NU1 681 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 TGS1Q96RS0 853 aaKnown RBP14.31□□□□□ -0.12
PHF1-210ENST00000488767 CDX2Q99626 313 aaPredicted RBP14.31□□□□□ -0.12
PHF1-210ENST00000488767 POLR3FQ9H1D9 316 aaPredicted RBP14.31□□□□□ -0.12
PHF1-210ENST00000488767 BHMT2Q9H2M3 363 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 PIN4Q9Y237 131 aaKnown RBP14.31□□□□□ -0.12
PHF1-210ENST00000488767 RWDD3Q9Y3V2 267 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 SIP14410 1827 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 MICAL3Q7RTP6 2002 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 EVPLQ92817 2033 aa14.31□□□□□ -0.12
PHF1-210ENST00000488767 PP2D1A8MPX8 630 aa14.3□□□□□ -0.12
PHF1-210ENST00000488767 EYA4O95677 639 aa14.3□□□□□ -0.12
PHF1-210ENST00000488767 ZSCAN22P10073 491 aaPredicted RBP14.3□□□□□ -0.12
PHF1-210ENST00000488767 CYP11B2P19099 503 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms