RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RGS19P49795 217 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 TBC1D8BQ0IIM8 1120 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 PDILTQ8N807 584 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 BMP2KQ9NSY1 1161 aaPredicted RBP21.46■■□□□ 1.03
CCM2-216ENST00000488727 HOOK1Q9UJC3 728 aaKnown RBP21.46■■□□□ 1.03
CCM2-216ENST00000488727 R3HCC1Q9Y3T6 440 aaKnown RBP21.46■■□□□ 1.03
CCM2-216ENST00000488727 EYA4O95677 639 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 CLTBP09497 229 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 TPM4P67936 248 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 PTK7Q13308 1070 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 NAALADL2Q58DX5 795 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 SH3RF1Q7Z6J0 888 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 CNNM3Q8NE01 707 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 DHX33Q9H6R0 707 aaKnown RBP21.46■■□□□ 1.03
CCM2-216ENST00000488727 PDLIM7Q9NR12 457 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 PCDH10Q9P2E7 1040 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 PCDHA2Q9Y5H9 948 aa21.46■■□□□ 1.03
CCM2-216ENST00000488727 IGKV6-21A0A0C4DH24 114 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 MAFO75444 373 aaPredicted RBP21.45■■□□□ 1.02
CCM2-216ENST00000488727 NCAPHQ15003 741 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 LONRF3Q496Y0 759 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 C7orf61Q8IZ16 206 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 LRRC71Q8N4P6 559 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 KCTD17Q8N5Z5 321 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 LINC01465Q8N7H1 131 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 TBX21Q9UL17 535 aa21.45■■□□□ 1.02
CCM2-216ENST00000488727 MDM2Q00987 491 aaPredicted RBP21.44■■□□□ 1.02
CCM2-216ENST00000488727 TRIM71Q2Q1W2 868 aaKnown RBP21.44■■□□□ 1.02
CCM2-216ENST00000488727 CCDC43Q96MW1 224 aaKnown RBP21.44■■□□□ 1.02
CCM2-216ENST00000488727 XPNPEP1Q9NQW7 623 aa21.44■■□□□ 1.02
CCM2-216ENST00000488727 PPME1Q9Y570 386 aa21.44■■□□□ 1.02
CCM2-216ENST00000488727 TNRC18O15417 2968 aaPredicted RBP21.44■■□□□ 1.02
CCM2-216ENST00000488727 ARHGEF35A5YM69 484 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 BIN1O00499 593 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 MAGEB2O15479 319 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 EVI5O60447 810 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 USO1O60763 962 aaKnown RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 POLGP54098 1239 aaPredicted RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 MKRN4PQ13434 485 aaPredicted RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 DRP2Q13474 957 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 PNOCQ13519 176 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 EMC2Q15006 297 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 E2F4Q16254 413 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 RRAGBQ5VZM2 374 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 EFCAB12Q6NXP0 572 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 METTL13Q8N6R0 699 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 RAD54LQ92698 747 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 SIP14410 1827 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 TRIM43BA6NCK2 446 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 PLA2G4BP0C869 781 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 RFC5P40937 340 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 CLCN3P51790 818 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 SLC12A3P55017 1021 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 KANK3Q6NY19 840 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 TAF2Q6P1X5 1199 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 PADI6Q6TGC4 694 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 KIAA0319LQ8IZA0 1049 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 SYT2Q8N9I0 419 aaPredicted RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 DNAJB3Q8WWF6 145 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 SLC7A3Q8WY07 619 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 LARP4BQ92615 738 aaKnown RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 DPF3Q92784 378 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 TRIM43Q96BQ3 446 aaPredicted RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 NOC4LQ9BVI4 516 aaKnown RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 FAM49AQ9H0Q0 323 aaPredicted RBP21.43■■□□□ 1.02
CCM2-216ENST00000488727 SUGCTQ9HAC7 445 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 TMEM39AQ9NV64 488 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 STK17AQ9UEE5 414 aa21.43■■□□□ 1.02
CCM2-216ENST00000488727 UMODL1Q5DID0 1318 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 DGAT1O75907 488 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 STAT6P42226 847 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 MCM6Q14566 821 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 NT5DC1Q5TFE4 455 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 RUSC1Q9BVN2 902 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 PRDM5Q9NQX1 630 aaPredicted RBP21.42■■□□□ 1.02
CCM2-216ENST00000488727 TANC1Q9C0D5 1861 aa21.42■■□□□ 1.02
CCM2-216ENST00000488727 RBAK-RBAKDNI3L0D1 243 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 POLR2DO15514 142 aaKnown RBP21.41■■□□□ 1.02
CCM2-216ENST00000488727 SSBP05455 408 aaKnown RBP eCLIP21.41■■□□□ 1.02
CCM2-216ENST00000488727 ITGB8P26012 769 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 C17orf53Q8N3J3 647 aaPredicted RBP21.41■■□□□ 1.02
CCM2-216ENST00000488727 RETREG2Q8NC44 543 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 DHX58Q96C10 678 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 HIPK3Q9H422 1215 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 ATP6V0A4Q9HBG4 840 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 IMPACTQ9P2X3 320 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 KIAA0355O15063 1070 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 RBL2Q08999 1139 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 DHX8Q14562 1220 aaKnown RBP21.41■■□□□ 1.02
CCM2-216ENST00000488727 POSTNQ15063 836 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 RINT1Q6NUQ1 792 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 RPAINQ86UA6 219 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 CACTINQ8WUQ7 758 aaKnown RBP21.41■■□□□ 1.02
CCM2-216ENST00000488727 MTRQ99707 1265 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 PPP1R12CQ9BZL4 782 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 PCDHA5Q9Y5H7 936 aa21.41■■□□□ 1.02
CCM2-216ENST00000488727 LTBP2Q14767 1821 aa21.4■■□□□ 1.02
CCM2-216ENST00000488727 ACTN4O43707 911 aaKnown RBP21.4■■□□□ 1.02
CCM2-216ENST00000488727 CKBP12277 381 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms