RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 POU3F3P20264 500 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 RFC5P40937 340 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 FXR2P51116 673 aaKnown RBP eCLIP17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 FAM189BP81408 668 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 IL17AQ16552 155 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 ODR4Q5SWX8 454 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 KSR1Q8IVT5 923 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 SLC7A3Q8WY07 619 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 POLR3CQ9BUI4 534 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 TUFT1Q9NNX1 390 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 XPNPEP1Q9NQW7 623 aa17.82■□□□□ 0.44
CTDSP1-209ENST00000488627 MICAL3Q7RTP6 2002 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 A0A087WZ62 844 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 CSDE1O75534 798 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 RARRES1P49788 294 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 POLGP54098 1239 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 RILPL1Q5EBL4 403 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 ZNF410Q86VK4 478 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 NPAS4Q8IUM7 802 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 EXOC8Q8IYI6 725 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 PIGOQ8TEQ8 1089 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 PRPF31Q8WWY3 499 aaKnown RBP17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 NLRP7Q8WX94 980 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 TMEM143Q96AN5 459 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 FDXACB1Q9BRP7 624 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 C17orf80Q9BSJ5 609 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 IFT122Q9HBG6 1241 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 EYSQ5T1H1 3165 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 MYO9BQ13459 2157 aa17.81■□□□□ 0.44
CTDSP1-209ENST00000488627 FGFR4P22455 802 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 RPA1P27694 616 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 SARSP49591 514 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 PDIA5Q14554 519 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 EMC2Q15006 297 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 SLC24A5Q71RS6 500 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 IGSF22Q8N9C0 903 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 SNX21Q969T3 373 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 GCOM2Q9BZD3 368 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 BMP2KQ9NSY1 1161 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 EVPLQ92817 2033 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 GBF1Q92538 1859 aa17.8■□□□□ 0.44
CTDSP1-209ENST00000488627 TTC3P53804 2025 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 WDR81Q562E7 1941 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 GAS2O43903 313 aaKnown RBP17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 IGFBP4P22692 258 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 PRPHP41219 470 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 GRB10Q13322 594 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 ECM1Q16610 540 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 C1orf112Q9NSG2 853 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 MTUS1Q9ULD2 1270 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 COL4A3BPQ9Y5P4 624 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 MTCH2Q9Y6C9 303 aa17.79■□□□□ 0.44
CTDSP1-209ENST00000488627 DENND3A2RUS2 1198 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 K7ELQ4 463 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 LAD1O00515 517 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 STAG3L1P0CL83 205 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 ATP2C1P98194 919 aaPredicted RBP17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 LAMTOR4Q0VGL1 99 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 EPC2Q52LR7 807 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 PSPC1Q8WXF1 523 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 NLRP4Q96MN2 994 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 SCLT1Q96NL6 688 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 NACC1Q96RE7 527 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 DBR1Q9UK59 544 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 PRUNE2Q8WUY3 3088 aa17.78■□□□□ 0.44
CTDSP1-209ENST00000488627 ADGRA3Q8IWK6 1321 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 DGAT1O75907 488 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 MUTP22033 750 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 ARL2P36404 184 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 GATMP50440 423 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 POTEGQ6S5H5 508 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 TMEM192Q8IY95 271 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 ERMNQ8TAM6 284 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 GDPD5Q8WTR4 605 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 TCP11Q8WWU5 503 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 CLP1Q92989 425 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 SAMD11Q96NU1 681 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 MTRQ99707 1265 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 ELAC1Q9H777 363 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 MINDY3Q9H8M7 445 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 PCDHB7Q9Y5E2 793 aa17.77■□□□□ 0.44
CTDSP1-209ENST00000488627 COL4A6Q14031 1691 aa17.77■□□□□ 0.43
CTDSP1-209ENST00000488627 ASAP2O43150 1006 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 SRGAP2CP0DJJ0 459 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 BMPR1AP36894 532 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 BTG3Q14201 252 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 FAM102BQ5T8I3 360 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 CMTR2Q8IYT2 770 aaKnown RBP17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 ASAP3Q8TDY4 903 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 MMTAG2Q9BU76 263 aaKnown RBP17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 INO80BQ9C086 356 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 ATP6V0A4Q9HBG4 840 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 CHST12Q9NRB3 414 aa17.76■□□□□ 0.43
CTDSP1-209ENST00000488627 RNF19AQ9NV58 838 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms