RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 TLL1O43897 1013 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 EIF4BP23588 611 aaKnown RBP16.77■□□□□ 0.28
CXCL12-207ENST00000488591 PBX2P40425 430 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 DRP2Q13474 957 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 ZNF410Q86VK4 478 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 DEFB123Q8N688 67 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 TMEM40Q8WWA1 233 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 TMEM143Q96AN5 459 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 AK8Q96MA6 479 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 SLC28A3Q9HAS3 691 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 ERVK-5Q9HDB9 667 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 ST3GAL5Q9UNP4 418 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 KIAA1024Q9UPX6 916 aa16.77■□□□□ 0.28
CXCL12-207ENST00000488591 MICAL3Q7RTP6 2002 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 ARID2Q68CP9 1835 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 ENPP3O14638 875 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 DARSP14868 501 aaKnown RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 MXD4Q14582 209 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 ZNF668Q96K58 619 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 ZNF396Q96N95 335 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 RAD9AQ99638 391 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 BMP2KQ9NSY1 1161 aaPredicted RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
CXCL12-207ENST00000488591 DNM3Q9UQ16 869 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 COL4A3BPQ9Y5P4 624 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 CLIC4Q9Y696 253 aa16.76■□□□□ 0.27
CXCL12-207ENST00000488591 A0A087WZ62 844 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 DENND3A2RUS2 1198 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 PP2D1A8MPX8 630 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 USO1O60763 962 aaKnown RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 GJB5O95377 273 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 ZSCAN22P10073 491 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 CDC25AP30304 524 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 LONP1P36776 959 aaKnown RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 TFDP1Q14186 410 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 ZRSR1Q15695 479 aaKnown RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 FAM117BQ6P1L5 589 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 FAM173BQ6P4H8 233 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 KCTD17Q8N5Z5 321 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 MCPH1Q8NEM0 835 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 TOP1MTQ969P6 601 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 CDK5RAP3Q96JB5 506 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 NLRP4Q96MN2 994 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 FDXACB1Q9BRP7 624 aaPredicted RBP16.75■□□□□ 0.27
CXCL12-207ENST00000488591 NT5C3AQ9H0P0 336 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 NKX2-4Q9H2Z4 354 aa16.75■□□□□ 0.27
CXCL12-207ENST00000488591 SLC26A4O43511 780 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 UPP2O95045 317 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 SRGAP2CP0DJJ0 459 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 ZSCAN20P17040 1043 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 SFPQP23246 707 aaKnown RBP eCLIP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 UBA7P41226 1012 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 CEBPZQ03701 1054 aaKnown RBP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 PADI6Q6TGC4 694 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 Q7L0L9 218 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 TMCO2Q7Z6W1 182 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 FAM228AQ86W67 206 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 KSR1Q8IVT5 923 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 TSPYL2Q9H2G4 693 aaPredicted RBP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 BHMT2Q9H2M3 363 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 SEMA6BQ9H3T3 888 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 ZNF576Q9H609 170 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 C1orf112Q9NSG2 853 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 YBX2Q9Y2T7 364 aaKnown RBP16.74■□□□□ 0.27
CXCL12-207ENST00000488591 INSL6Q9Y581 213 aa16.74■□□□□ 0.27
CXCL12-207ENST00000488591 GBF1Q92538 1859 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 CA3P07451 260 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 STAG3L1P0CL83 205 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 MYOGP15173 224 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 PTPAQ15257 358 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 ECM1Q16610 540 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-207ENST00000488591 PPP2R2DQ66LE6 453 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 SRGAP1Q7Z6B7 1085 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 CABP7Q86V35 215 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 FOXD4L4Q8WXT5 416 aaPredicted RBP16.73■□□□□ 0.27
CXCL12-207ENST00000488591 CALML4Q96GE6 196 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 FAM161BQ96MY7 647 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 ADAM2Q99965 735 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 MMTAG2Q9BU76 263 aaKnown RBP16.73■□□□□ 0.27
CXCL12-207ENST00000488591 TMX1Q9H3N1 280 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 XPNPEP1Q9NQW7 623 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 RGS18Q9NS28 235 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 LRFN2Q9ULH4 789 aa16.73■□□□□ 0.27
CXCL12-207ENST00000488591 RBAK-RBAKDNI3L0D1 243 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 EYA4O95677 639 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 F13A1P00488 732 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 CYP11B2P19099 503 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 ARL2P36404 184 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 PHKA2P46019 1235 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 HYIQ5T013 277 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 FAM102BQ5T8I3 360 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 SLC24A5Q71RS6 500 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 MAEAQ7L5Y9 396 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 RTN4RL1Q86UN2 441 aaPredicted RBP16.72■□□□□ 0.27
CXCL12-207ENST00000488591 RNF149Q8NC42 400 aa16.72■□□□□ 0.27
CXCL12-207ENST00000488591 RASSF8Q8NHQ8 419 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms