RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 EIF3DO15371 548 aaKnown RBP eCLIP14.03□□□□□ -0.16
NELFE-209ENST00000488426 ATG7O95352 703 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 SUPT20HL2P0C7V6 817 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 SP2Q02086 613 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 ACVR2BQ13705 512 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 SPECC1LQ69YQ0 1117 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 OTUD6AQ7L8S5 288 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 FGFBP2Q9BYJ0 223 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 KCNF1Q9H3M0 494 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 GABBR1Q9UBS5 961 aa14.03□□□□□ -0.16
NELFE-209ENST00000488426 MYH9P35579 1960 aaKnown RBP14.03□□□□□ -0.16
NELFE-209ENST00000488426 SYNGAP1Q96PV0 1343 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 IGSF9BQ9UPX0 1349 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.02□□□□□ -0.16
NELFE-209ENST00000488426 N4BP3O15049 544 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 TPM2P07951 284 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 UBA1P22314 1058 aaKnown RBP14.02□□□□□ -0.16
NELFE-209ENST00000488426 EDRF1Q3B7T1 1238 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 STXBP4Q6ZWJ1 553 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 LRRC8AQ8IWT6 810 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 MYCT1Q8N699 235 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 ZNF830Q96NB3 372 aaPredicted RBP14.02□□□□□ -0.16
NELFE-209ENST00000488426 KCTD10Q9H3F6 313 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 MRPL44Q9H9J2 332 aaKnown RBP14.02□□□□□ -0.16
NELFE-209ENST00000488426 XPNPEP3Q9NQH7 507 aa14.02□□□□□ -0.16
NELFE-209ENST00000488426 ADAMTS4O75173 837 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 RARBP10826 455 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 PBX1P40424 430 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 FKBP3Q00688 224 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 MAPK7Q13164 816 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 SLC39A5Q6ZMH5 540 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 CYFIP1Q7L576 1253 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 EEPD1Q7L9B9 569 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 ZNF507Q8TCN5 953 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 CACTINQ8WUQ7 758 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 CNOT6LQ96LI5 555 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 CEP63Q96MT8 703 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 GDF15Q99988 308 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 PDGFCQ9NRA1 345 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 TAB2Q9NYJ8 693 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 ITIH6Q6UXX5 1313 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 HIP1RO75146 1068 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 GCNT3O95395 438 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 MAPTP10636 758 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 AKR1A1P14550 325 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 MAGEA10P43363 369 aaPredicted RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 CASP5P51878 434 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 TBX2Q13207 712 aaPredicted RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 KNOP1Q1ED39 458 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 SWSAP1Q6NVH7 229 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 METTL7BQ6UX53 244 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 LRRC55Q6ZSA7 311 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 ZC3H3Q8IXZ2 948 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 DRC1Q96MC2 740 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 BCAS3Q9H6U6 928 aa14.01□□□□□ -0.17
NELFE-209ENST00000488426 LARSQ9P2J5 1176 aaKnown RBP14.01□□□□□ -0.17
NELFE-209ENST00000488426 IGKV6D-21A0A0A0MT36 114 aa14□□□□□ -0.17
NELFE-209ENST00000488426 LGALS16A8MUM7 142 aa14□□□□□ -0.17
NELFE-209ENST00000488426 BACH1O14867 736 aa14□□□□□ -0.17
NELFE-209ENST00000488426 TEX33O43247 280 aa14□□□□□ -0.17
NELFE-209ENST00000488426 ZNF862O60290 1169 aa14□□□□□ -0.17
NELFE-209ENST00000488426 ZNF500O60304 480 aaPredicted RBP14□□□□□ -0.17
NELFE-209ENST00000488426 STBD1O95210 358 aa14□□□□□ -0.17
NELFE-209ENST00000488426 GNA14O95837 355 aa14□□□□□ -0.17
NELFE-209ENST00000488426 MYBP10242 640 aa14□□□□□ -0.17
NELFE-209ENST00000488426 SFPQP23246 707 aaKnown RBP eCLIP14□□□□□ -0.17
NELFE-209ENST00000488426 SP4Q02446 784 aa14□□□□□ -0.17
NELFE-209ENST00000488426 ALCAMQ13740 583 aa14□□□□□ -0.17
NELFE-209ENST00000488426 XKR9Q5GH70 373 aa14□□□□□ -0.17
NELFE-209ENST00000488426 ODR4Q5SWX8 454 aa14□□□□□ -0.17
NELFE-209ENST00000488426 ANO5Q75V66 913 aa14□□□□□ -0.17
NELFE-209ENST00000488426 NELFCDQ8IXH7 590 aa14□□□□□ -0.17
NELFE-209ENST00000488426 FAM178BQ8IXR5 827 aa14□□□□□ -0.17
NELFE-209ENST00000488426 DAW1Q8N136 415 aa14□□□□□ -0.17
NELFE-209ENST00000488426 MSL3Q8N5Y2 521 aaKnown RBP14□□□□□ -0.17
NELFE-209ENST00000488426 TUBGCP2Q9BSJ2 902 aa14□□□□□ -0.17
NELFE-209ENST00000488426 VPS16Q9H269 839 aa14□□□□□ -0.17
NELFE-209ENST00000488426 DDX41Q9UJV9 622 aaKnown RBP14□□□□□ -0.17
NELFE-209ENST00000488426 TRAF3IP3Q9Y228 551 aa14□□□□□ -0.17
NELFE-209ENST00000488426 PDXKO00764 312 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 USO1O60763 962 aaKnown RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 MTIF2P46199 727 aaKnown RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 RTP1P59025 263 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 PRKCEQ02156 737 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 UTP14CQ5TAP6 766 aaKnown RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 CCSAPQ6IQ19 270 aaPredicted RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 CREBRFQ8IUR6 639 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 SLC17A8Q8NDX2 589 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 KLHDC9Q8NEP7 349 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 FIZ1Q96SL8 496 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 ABHD16BQ9H3Z7 469 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 ZNF302Q9NR11 478 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 TYW1Q9NV66 732 aaKnown RBP13.99□□□□□ -0.17
NELFE-209ENST00000488426 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 ATP11BQ9Y2G3 1177 aa13.99□□□□□ -0.17
NELFE-209ENST00000488426 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms