RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TGFBRAP1Q8WUH2 860 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 LCORQ96JN0 433 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 SMAD5Q99717 465 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 TRIM8Q9BZR9 551 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 CCDC8Q9H0W5 538 aaPredicted RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 DDX56Q9NY93 547 aaKnown RBP5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 TRHDEQ9UKU6 1024 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 SYNPO2Q9UMS6 1093 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 USP18Q9UMW8 372 aa5.24□□□□□ -1.57
ECHDC1-217ENST00000488087 MYPNQ86TC9 1320 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 WASHC2CQ9Y4E1 1318 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 PRSS38A1L453 326 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 C9orf118A6NHY6 69 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 STAT5BP51692 787 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 RRADP55042 308 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 UGT8Q16880 541 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 BRDTQ58F21 947 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 SYDE2Q5VT97 1194 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 TMEM200BQ69YZ2 307 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 Q6ZUG5 572 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 GPR155Q7Z3F1 870 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 FAM124AQ86V42 546 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 RTKN2Q8IZC4 609 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 KLHL36Q8N4N3 616 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 HIST1H2AHQ96KK5 128 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 CEP89Q96ST8 783 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 HIST1H2AJQ99878 128 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 NOL10Q9BSC4 688 aaKnown RBP5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 MENTQ9BUN1 341 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 USP40Q9NVE5 1235 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 SAE1Q9UBE0 346 aaPredicted RBP5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 EDARQ9UNE0 448 aa5.23□□□□□ -1.57
ECHDC1-217ENST00000488087 MROH6A6NGR9 719 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 OPHN1O60890 802 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 MAFO75444 373 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 SASH1O94885 1247 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 LPLP06858 475 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 BMP7P18075 431 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 ENPP1P22413 925 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 ETV4P43268 484 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 MEOX1P50221 254 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 ERVK-21P61565 698 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 KIAA2012Q0VF49 1180 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 KLF1Q13351 362 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 TOP3AQ13472 1001 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 EIF4HQ15056 248 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 FSCN1Q16658 493 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 NT5DC1Q5TFE4 455 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 BMP8AQ7Z5Y6 402 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 C1QL4Q86Z23 238 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 REXO1L1PQ8IX06 675 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 AMOTL1Q8IY63 956 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 CDYL2Q8N8U2 506 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 LMBR1Q8WVP7 490 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 EAF2Q96CJ1 260 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 DYDC2Q96IM9 177 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 CARD11Q9BXL7 1154 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 QRSL1Q9H0R6 528 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 WNT8AQ9H1J5 351 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 LUC7LQ9NQ29 371 aaKnown RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 POLR3BQ9NW08 1133 aaPredicted RBP5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 DENND2AQ9ULE3 1009 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 FAM184BQ9ULE4 1060 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 PCDHB6Q9Y5E3 794 aa5.22□□□□□ -1.57
ECHDC1-217ENST00000488087 KRTAP9-7A8MTY7 169 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 K7ESF4 209 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 TRIM13O60858 407 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 MT-CO1P00395 513 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PFKMP08237 780 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PDGFRBP09619 1106 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 MYBL2P10244 700 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 XPAP23025 273 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 IARSP41252 1262 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 LGALS4P56470 323 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 EXOSC10Q01780 885 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PPARAQ07869 468 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 USP10Q14694 798 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 CLUL1Q15846 466 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 ZNF568Q3ZCX4 644 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PITRM1Q5JRX3 1037 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PGM2L1Q6PCE3 622 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 BORAQ6PGQ7 559 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 RALYLQ86SE5 291 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 SYT8Q8NBV8 401 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 GAB3Q8WWW8 586 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 AJUBAQ96IF1 538 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 PITHD1Q9GZP4 211 aaPredicted RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 KATNBL1Q9H079 304 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 KCTD10Q9H3F6 313 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 TYW1Q9NV66 732 aaKnown RBP5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 DNAJC28Q9NX36 388 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 DNAI1Q9UI46 699 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 ADAM29Q9UKF5 820 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 NUMBLQ9Y6R0 609 aa5.21□□□□□ -1.58
ECHDC1-217ENST00000488087 A0A0A6YYJ9 748 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 GABRDO14764 452 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 ZNF888P0CJ79 500 aaPredicted RBP5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 ANTXR2P58335 489 aa5.2□□□□□ -1.58
ECHDC1-217ENST00000488087 SPIDRQ14159 915 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms