RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ZNF658Q5TYW1 1059 aaPredicted RBP12.22□□□□□ -0.45
HDLBP-242ENST00000488013 DYMQ7RTS9 669 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 TRMT1LQ7Z2T5 733 aaKnown RBP12.22□□□□□ -0.45
HDLBP-242ENST00000488013 RSPH3Q86UC2 560 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 GRAMD1CQ8IYS0 662 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 NME8Q8N427 588 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 MYCT1Q8N699 235 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 LRRC15Q8TF66 581 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 SPIRE2Q8WWL2 714 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 PSPC1Q8WXF1 523 aaKnown RBP12.22□□□□□ -0.45
HDLBP-242ENST00000488013 STAMQ92783 540 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 KCNN1Q92952 543 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 NTPCRQ9BSD7 190 aaKnown RBP12.22□□□□□ -0.45
HDLBP-242ENST00000488013 PCDHA2Q9Y5H9 948 aa12.22□□□□□ -0.45
HDLBP-242ENST00000488013 MGAMO43451 1857 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 A0A087WWV3 80 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 A0A0U1RQG5 324 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MBLAC1A4D2B0 266 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MYADML2A6NDP7 307 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 ZBTB42B2RXF5 422 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 HIP1RO75146 1068 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 C22orf31O95567 290 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 TFRCP02786 760 aaKnown RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 PTGS1P23219 599 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 KLRC1P26715 233 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 HOXC8P31273 242 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 GJA8P48165 433 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 NLRP12P59046 1061 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 POU5F1BQ06416 359 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MORC3Q14149 939 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MTFR1Q15390 333 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 KMT5BQ4FZB7 885 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 COBLL1Q53SF7 1204 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 FAM26FQ5R3K3 315 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 ODR4Q5SWX8 454 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MTHFD1LQ6UB35 978 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 FAM43BQ6ZT52 329 aaPredicted RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 FAM178BQ8IXR5 827 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 U2AF1L4Q8WU68 220 aaKnown RBP12.21□□□□□ -0.45
HDLBP-242ENST00000488013 CEP89Q96ST8 783 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 ZHX3Q9H4I2 956 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 STARD7Q9NQZ5 370 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 GTF2IRD1Q9UHL9 959 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 MAN1B1Q9UKM7 699 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 PCDHB13Q9Y5F0 798 aa12.21□□□□□ -0.45
HDLBP-242ENST00000488013 PLXNA1Q9UIW2 1896 aa12.21□□□□□ -0.46
HDLBP-242ENST00000488013 DOCK3Q8IZD9 2030 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 MROH7Q68CQ1 1323 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 SMIM35A0A1B0GVV1 85 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 SYCE3A1L190 88 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 CAND2O75155 1236 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 ARL2P36404 184 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 NAMPTP43490 491 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 EFNA5P52803 228 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 EHHADHQ08426 723 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 COASYQ13057 564 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 ITGA7Q13683 1181 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 HSP90AA2PQ14568 343 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-242ENST00000488013 PCBP1Q15365 356 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDLBP-242ENST00000488013 NBPF20Q3BBV1 942 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 EFCAB12Q6NXP0 572 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 LRSAM1Q6UWE0 723 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 METTL13Q8N6R0 699 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 LMBR1Q8WVP7 490 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 HVCN1Q96D96 273 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 GZF1Q9H116 711 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-242ENST00000488013 C2orf40Q9H1Z8 148 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 MRPL44Q9H9J2 332 aaKnown RBP12.2□□□□□ -0.46
HDLBP-242ENST00000488013 SUGCTQ9HAC7 445 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 SETD4Q9NVD3 440 aa12.2□□□□□ -0.46
HDLBP-242ENST00000488013 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
HDLBP-242ENST00000488013 UBE4BO95155 1302 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 A0A1W2PQ45 241 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 A0A1W2PQY0 241 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 TMEM150BA6NC51 233 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 PSMA7O14818 248 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 EIF3DO15371 548 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 KLRC4O43908 158 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 ERCC5P28715 1186 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 CHMP4BP1P59074 171 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 SNRPFP62306 86 aaKnown RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 IGBP1P78318 339 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 TYRO3Q06418 890 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 FOXR2Q6PJQ5 311 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 RPAINQ86UA6 219 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 ZNF410Q86VK4 478 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 GUF1Q8N442 669 aaKnown RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 DEPTORQ8TB45 409 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 GOLGA5Q8TBA6 731 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 DHTKD1Q96HY7 919 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 NFKBIZQ9BYH8 718 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 MCOLN1Q9GZU1 580 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 POLR3FQ9H1D9 316 aaPredicted RBP12.19□□□□□ -0.46
HDLBP-242ENST00000488013 TMEM206Q9H813 350 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 XPNPEP1Q9NQW7 623 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 HDAC6Q9UBN7 1215 aa12.19□□□□□ -0.46
HDLBP-242ENST00000488013 EXOC7Q9UPT5 735 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms