RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 MCM8Q9UJA3 840 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 ZKSCAN5Q9Y2L8 839 aa5.24□□□□□ -1.57
HMGB1P36-201ENST00000487709 CCDC66A2RUB6 948 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 GAS7O60861 476 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 DNAJC8O75937 253 aaPredicted RBP5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 KRT4P19013 534 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 MASP1P48740 699 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 DNM2P50570 870 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 OCRLQ01968 901 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 PCOLCEQ15113 449 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 PTPROQ16827 1216 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 PIK3R6Q5UE93 754 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 ANKRD13AQ8IZ07 590 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 RTKN2Q8IZC4 609 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 OR2W6PQ8NHA6 318 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 CLUHP3Q96NS8 147 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 CELF4Q9BZC1 486 aaKnown RBP5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 SAMD15Q9P1V8 674 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 ASXL2Q76L83 1435 aa5.23□□□□□ -1.57
HMGB1P36-201ENST00000487709 TCRBV5S4A2TA0A5A2 114 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 FAM90A27PA6NNH2 459 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 WNT9AO14904 365 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 HIP1RO75146 1068 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 BMP5P22003 454 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 PTGS1P23219 599 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 STAT3P40763 770 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 MRE11P49959 708 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 MEOX1P50221 254 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 SCNN1BP51168 640 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 ARHGAP44Q17R89 818 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 DDX46Q7L014 1031 aaKnown RBP5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 C16orf59Q7L2K0 433 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 KRT26Q7Z3Y9 468 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 FGD2Q7Z6J4 655 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 C11orf74Q86VG3 221 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 TMPRSS6Q8IU80 811 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 NLGN4XQ8N0W4 816 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 USP7Q93009 1102 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 VOPP1Q96AW1 172 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 PRRX2Q99811 253 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 BRINP2Q9C0B6 783 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 OR10A2Q9H208 303 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 NELFAQ9H3P2 528 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 WDR26Q9H7D7 661 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 INCENPQ9NQS7 918 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 IFT57Q9NWB7 429 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 FBXO10Q9UK96 956 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 FAM184BQ9ULE4 1060 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 COL4A3BPQ9Y5P4 624 aa5.22□□□□□ -1.57
HMGB1P36-201ENST00000487709 KPNA6O60684 536 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 RPS6KA4O75676 772 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 VIL1P09327 827 aaKnown RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 SDSP20132 328 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 POU3F2P20265 443 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 MC4RP32245 332 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 IGBP1P78318 339 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 RRP1BQ14684 758 aaKnown RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 GPR19Q15760 415 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 TMEM177Q53S58 311 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 SPTY2D1Q68D10 685 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 Q6ZPA2 131 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 ADGRE4PQ86SQ3 457 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 KIF18BQ86Y91 864 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 THEMISQ8N1K5 641 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 C2orf69Q8N8R5 385 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 IGSF22Q8N9C0 903 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 SHCBP1Q8NEM2 672 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 PCDH19Q8TAB3 1148 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 LEO1Q8WVC0 666 aaPredicted RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 SCLYQ96I15 445 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 TARS2Q9BW92 718 aaKnown RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 SRPK3Q9UPE1 567 aa5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 NOP58Q9Y2X3 529 aaKnown RBP5.21□□□□□ -1.58
HMGB1P36-201ENST00000487709 PCSK5Q92824 1860 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 PRAMEF25A6NGN4 478 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 CYP27B1O15528 508 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 IL12RB1P42701 662 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 ZNF460Q14592 562 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 EIF4HQ15056 248 aaKnown RBP5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 FIGNQ5HY92 759 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 CDCA2Q69YH5 1023 aaPredicted RBP5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 ARHGAP36Q6ZRI8 547 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 ZNF662Q6ZS27 426 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 CHST14Q8NCH0 376 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 MSL2Q9HCI7 577 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 GALNT8Q9NY28 637 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 COQ6Q9Y2Z9 468 aa5.2□□□□□ -1.58
HMGB1P36-201ENST00000487709 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 GSG1L2A8MUP6 293 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 H7C1D1 291 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 M0R2C6 588 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 FOXN1O15353 648 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 PPM1GO15355 546 aaPredicted RBP5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 SLC26A4O43511 780 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 BRINP1O60477 761 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 PYGMP11217 842 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 KRT15P19012 456 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 GJA4P35212 333 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 STAT5BP51692 787 aa5.19□□□□□ -1.58
HMGB1P36-201ENST00000487709 IL2P60568 153 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms