RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 CYP26B1Q9NR63 512 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 LRFN2Q9ULH4 789 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 RWDD3Q9Y3V2 267 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 PRUNE2Q8WUY3 3088 aa12.83□□□□□ -0.36
SPEN-205ENST00000487496 COL4A4P53420 1690 aaPredicted RBP12.83□□□□□ -0.36
SPEN-205ENST00000487496 A0A0C4DFX4 3053 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 ST18O60284 1047 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 SLITRK3O94933 977 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 ATP2B1P20020 1258 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 YWHABP31946 246 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 TXKP42681 527 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 FAM189BP81408 668 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 TFF2Q03403 129 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 CTTNQ14247 550 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 PTPROQ16827 1216 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 TPH2Q8IWU9 490 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 SYMPKQ92797 1274 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 MRPL38Q96DV4 380 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 CEP170P1Q96L14 293 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 SCLT1Q96NL6 688 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 EIF2AK1Q9BQI3 630 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 JPH2Q9BR39 696 aaPredicted RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 TMEM60Q9H2L4 133 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 RNF216Q9NWF9 866 aaPredicted RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 COG5Q9UP83 839 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 PPME1Q9Y570 386 aa12.82□□□□□ -0.36
SPEN-205ENST00000487496 MRPL42Q9Y6G3 142 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 SPTBN5Q9NRC6 3674 aaKnown RBP12.82□□□□□ -0.36
SPEN-205ENST00000487496 CUL9Q8IWT3 2517 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 A0A087WZ62 844 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 ZBTB39O15060 712 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 CSDE1O75534 798 aaKnown RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 FGFR4P22455 802 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 MCM7P33993 719 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 FAM102BQ5T8I3 360 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 OTUD6AQ7L8S5 288 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 ZNF410Q86VK4 478 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 RHPN2Q8IUC4 686 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 KSR1Q8IVT5 923 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 SLC7A3Q8WY07 619 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 HLA-CQ95604 372 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 FDXACB1Q9BRP7 624 aaPredicted RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 GCOM2Q9BZD3 368 aaPredicted RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 ELAC1Q9H777 363 aaKnown RBP12.81□□□□□ -0.36
SPEN-205ENST00000487496 FOXD4L1Q9NU39 408 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 TMEM161AQ9NX61 479 aa12.81□□□□□ -0.36
SPEN-205ENST00000487496 TRANK1O15050 2925 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 GRM6O15303 877 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 LYPLA2O95372 231 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 RFC5P40937 340 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 POLGP54098 1239 aaPredicted RBP12.8□□□□□ -0.36
SPEN-205ENST00000487496 ZNF174Q15697 407 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 XKR9Q5GH70 373 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 NOSTRINQ8IVI9 506 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 EXOC8Q8IYI6 725 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 PRPF31Q8WWY3 499 aaKnown RBP12.8□□□□□ -0.36
SPEN-205ENST00000487496 TMEM143Q96AN5 459 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 NLRP4Q96MN2 994 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
SPEN-205ENST00000487496 ATP6V0A4Q9HBG4 840 aa12.8□□□□□ -0.36
SPEN-205ENST00000487496 POTEMA6NI47 508 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 TBKBP1A7MCY6 615 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 CD2BP2O95400 341 aaKnown RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 FGFR1P11362 822 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 SFPQP23246 707 aaKnown RBP eCLIP12.79□□□□□ -0.36
SPEN-205ENST00000487496 ORC2Q13416 577 aaPredicted RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 GNL2Q13823 731 aaKnown RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 AAK1Q2M2I8 961 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 TIGD5Q53EQ6 642 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 NEK9Q8TD19 979 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 P2RX5Q93086 422 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 TMX3Q96JJ7 454 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 LMAN2LQ9H0V9 348 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 IFT122Q9HBG6 1241 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 ALG13Q9NP73 1137 aaKnown RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 CHST12Q9NRB3 414 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
SPEN-205ENST00000487496 ANKEF1Q9NU02 776 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 PLAGL2Q9UPG8 496 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 COL4A3BPQ9Y5P4 624 aa12.79□□□□□ -0.36
SPEN-205ENST00000487496 RALGAPA2Q2PPJ7 1873 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.78□□□□□ -0.36
SPEN-205ENST00000487496 A0A0U1RQF3 1178 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 SRGAP2CP0DJJ0 459 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 BMP1P13497 986 aa12.78□□□□□ -0.36
SPEN-205ENST00000487496 U2AF2P26368 475 aaKnown RBP eCLIP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms