RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 RB1P06400 928 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 SFPQP23246 707 aaKnown RBP eCLIP11.47□□□□□ -0.57
RNF220-215ENST00000487332 RPA1P27694 616 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 POLGP54098 1239 aaPredicted RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 FAM189BP81408 668 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 POU5F1BQ06416 359 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 DRP2Q13474 957 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 TRMT1LQ7Z2T5 733 aaKnown RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 FIBCD1Q8N539 461 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 C4orf32Q8N8J7 132 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 ERMNQ8TAM6 284 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 PSPC1Q8WXF1 523 aaKnown RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 ARNTL2Q8WYA1 636 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 SUGCTQ9HAC7 445 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 CHST12Q9NRB3 414 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 TMEM161AQ9NX61 479 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 DBR1Q9UK59 544 aaKnown RBP11.47□□□□□ -0.57
RNF220-215ENST00000487332 SMC3Q9UQE7 1217 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 MTCH2Q9Y6C9 303 aa11.47□□□□□ -0.57
RNF220-215ENST00000487332 DENND3A2RUS2 1198 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 H3BNC9 293 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 ASAP2O43150 1006 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 HOXA2O43364 376 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 MGEA5O60502 916 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 UPP2O95045 317 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 RARRES1P49788 294 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 TOB1P50616 345 aaPredicted RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 NPEPPSP55786 919 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 CYP4A11Q02928 519 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 GRB10Q13322 594 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 CTTNQ14247 550 aaKnown RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 EMC2Q15006 297 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 EPC2Q52LR7 807 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 NAALADL2Q58DX5 795 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 FAM117BQ6P1L5 589 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 IFNLR1Q8IU57 520 aaPredicted RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.46□□□□□ -0.57
RNF220-215ENST00000487332 IGSF22Q8N9C0 903 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 FBXO22Q8NEZ5 403 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 NLRP7Q8WX94 980 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 P2RX5Q93086 422 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 INTS4Q96HW7 963 aaKnown RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 MTRQ99707 1265 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 ADAM2Q99965 735 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 C17orf80Q9BSJ5 609 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 PLVAPQ9BX97 442 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 NFKBIZQ9BYH8 718 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 RAB34Q9BZG1 259 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 LMAN2LQ9H0V9 348 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 ATP6V0A4Q9HBG4 840 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 DACT1Q9NYF0 836 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 SUCLA2Q9P2R7 463 aaPredicted RBP11.46□□□□□ -0.57
RNF220-215ENST00000487332 COL4A3BPQ9Y5P4 624 aa11.46□□□□□ -0.57
RNF220-215ENST00000487332 H3BQV1 296 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 SPATA31C1P0DKV0 1188 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
RNF220-215ENST00000487332 IGFBP4P22692 258 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 BTG3Q14201 252 aaPredicted RBP11.45□□□□□ -0.58
RNF220-215ENST00000487332 PDIA5Q14554 519 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 MXD4Q14582 209 aaPredicted RBP11.45□□□□□ -0.58
RNF220-215ENST00000487332 ZNF174Q15697 407 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 XKR9Q5GH70 373 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 BRAPQ7Z569 592 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 SPRED2Q7Z698 418 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 SRGAP1Q7Z6B7 1085 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 RHPN2Q8IUC4 686 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 TPH2Q8IWU9 490 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 TMEM192Q8IY95 271 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 SCLT1Q96NL6 688 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 PPP1R16BQ96T49 567 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
RNF220-215ENST00000487332 IFT122Q9HBG6 1241 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 XPNPEP1Q9NQW7 623 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 LRFN2Q9ULH4 789 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 COL6A3P12111 3177 aa11.45□□□□□ -0.58
RNF220-215ENST00000487332 CHD7Q9P2D1 2997 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 A0A087WZ62 844 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 A0A0U1RQF3 1178 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 CARNS1A5YM72 827 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 SLC26A4O43511 780 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 MED24O75448 989 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 EOMESO95936 686 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 BMP15O95972 392 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 SKIP12755 728 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 ATP2B1P20020 1258 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 PDCP20941 246 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 BMPR1AP36894 532 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 TECP42680 631 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 RAB27AP51159 221 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
RNF220-215ENST00000487332 PTPROQ16827 1216 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 CSPP1Q1MSJ5 1256 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 TIGD5Q53EQ6 642 aa11.44□□□□□ -0.58
RNF220-215ENST00000487332 ARL6IP4Q66PJ3 421 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms