RNA–Protein interactions for RNA: ENST00000487311.1

SRRT-212, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-212ENST00000487311 KCNB2Q92953 911 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 ASIC4Q96FT7 647 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 SAMM50Q9Y512 469 aa18.32■□□□□ 0.52
SRRT-212ENST00000487311 WDR81Q562E7 1941 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 MSH4O15457 936 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 SETQ01105 290 aaPredicted RBP18.31■□□□□ 0.52
SRRT-212ENST00000487311 DRP2Q13474 957 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 KRT32Q14532 448 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 BRF1Q92994 677 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 DISC1Q9NRI5 854 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 CEP131Q9UPN4 1083 aa18.31■□□□□ 0.52
SRRT-212ENST00000487311 USP34Q70CQ2 3546 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 CCDC196A0A1B0GTZ2 297 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 HMGB1P09429 215 aaKnown RBP18.3■□□□□ 0.52
SRRT-212ENST00000487311 ZSCAN20P17040 1043 aaPredicted RBP18.3■□□□□ 0.52
SRRT-212ENST00000487311 SP100P23497 879 aaPredicted RBP18.3■□□□□ 0.52
SRRT-212ENST00000487311 GPC3P51654 580 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 FGD1P98174 961 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 TCF15Q12870 199 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 ZNF598Q86UK7 904 aaKnown RBP18.3■□□□□ 0.52
SRRT-212ENST00000487311 RNF169Q8NCN4 708 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 ENTPD7Q9NQZ7 604 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 NRBP2Q9NSY0 501 aa18.3■□□□□ 0.52
SRRT-212ENST00000487311 PUF60Q9UHX1 559 aaKnown RBP18.3■□□□□ 0.52
SRRT-212ENST00000487311 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 NT5C1B-RDH14C9J2C7 533 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 OATP04181 439 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 DARSP14868 501 aaKnown RBP18.29■□□□□ 0.52
SRRT-212ENST00000487311 TMOD1P28289 359 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 GNA11P29992 359 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 VCPP55072 806 aaKnown RBP18.29■□□□□ 0.52
SRRT-212ENST00000487311 PRKCEQ02156 737 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 SIGLEC14Q08ET2 396 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 TMC7Q7Z402 723 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 FBXL6Q8N531 539 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 CCDC136Q96JN2 1154 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 JAKMIP1Q96N16 626 aaKnown RBP18.29■□□□□ 0.52
SRRT-212ENST00000487311 ZNF558Q96NG5 402 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 CEP89Q96ST8 783 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 MAP7D2Q96T17 732 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 UNC45AQ9H3U1 944 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 NGRNQ9NPE2 291 aaKnown RBP18.29■□□□□ 0.52
SRRT-212ENST00000487311 SPG21Q9NZD8 308 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 VPS54Q9P1Q0 977 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 SNX14Q9Y5W7 946 aa18.29■□□□□ 0.52
SRRT-212ENST00000487311 A0A0U1RQF3 1178 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 TMEM150BA6NC51 233 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 CHMP2AO43633 222 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 STBD1O95210 358 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 TARBP2Q15633 366 aaKnown RBP18.28■□□□□ 0.52
SRRT-212ENST00000487311 MCTP2Q6DN12 878 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 SLC39A11Q8N1S5 342 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 MRPL43Q8N983 215 aaKnown RBP18.28■□□□□ 0.52
SRRT-212ENST00000487311 HELQQ8TDG4 1101 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 CCDC12Q8WUD4 166 aaPredicted RBP18.28■□□□□ 0.52
SRRT-212ENST00000487311 SLC5A5Q92911 643 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 FAM167AQ96KS9 214 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 SH2D3AQ9BRG2 576 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
SRRT-212ENST00000487311 C2orf71A6NGG8 1288 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 HOXA2O43364 376 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 CDC45O75419 566 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 PDGFBP01127 241 aaPredicted RBP18.27■□□□□ 0.52
SRRT-212ENST00000487311 USP11P51784 963 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 CCT2P78371 535 aaKnown RBP18.27■□□□□ 0.52
SRRT-212ENST00000487311 KRT17Q04695 432 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 KANK3Q6NY19 840 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 ABI1Q8IZP0 508 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 LRRC43Q8N309 656 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 FBXL16Q8N461 479 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 FEZF2Q8TBJ5 459 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 SLC26A6Q9BXS9 759 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 NCOA5Q9HCD5 579 aaKnown RBP18.27■□□□□ 0.52
SRRT-212ENST00000487311 TCEAL9Q9UHQ7 104 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 HCFC2Q9Y5Z7 792 aa18.27■□□□□ 0.52
SRRT-212ENST00000487311 NID2Q14112 1375 aa18.27■□□□□ 0.51
SRRT-212ENST00000487311 MYO10Q9HD67 2058 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 FSD2A1L4K1 749 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 CLASP2O75122 1294 aaKnown RBP18.26■□□□□ 0.51
SRRT-212ENST00000487311 PSMD10O75832 226 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 EOMESO95936 686 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 HOXB8P17481 243 aaPredicted RBP18.26■□□□□ 0.51
SRRT-212ENST00000487311 PDIA3P30101 505 aaKnown RBP18.26■□□□□ 0.51
SRRT-212ENST00000487311 AVPR2P30518 371 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 HSPA4P34932 840 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 BCAR1P56945 870 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 PTPN21Q16825 1174 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 TMEM173Q86WV6 379 aaPredicted RBP18.26■□□□□ 0.51
SRRT-212ENST00000487311 SUGP1Q8IWZ8 645 aaKnown RBP18.26■□□□□ 0.51
SRRT-212ENST00000487311 RIT2Q99578 217 aa18.26■□□□□ 0.51
SRRT-212ENST00000487311 MEIS3P2A8K0S8 358 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 GAS7O60861 476 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 CXCL14O95715 111 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 WEE2P0C1S8 567 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 RPS6KB1P23443 525 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 PPM1AP35813 382 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 PTPN5P54829 565 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 AKAP17AQ02040 695 aaKnown RBP18.25■□□□□ 0.51
SRRT-212ENST00000487311 TBC1D8BQ0IIM8 1120 aa18.25■□□□□ 0.51
SRRT-212ENST00000487311 LONRF3Q496Y0 759 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms