RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 TATDN1Q6P1N9 297 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 PLEKHH3Q7Z736 793 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 ATG4DQ86TL0 474 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 CERS3Q8IU89 383 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 TEX11Q8IYF3 940 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 MFSD4AQ8N468 514 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 FAM13CQ8NE31 585 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 DNAJB8Q8NHS0 232 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 LPAR1Q92633 364 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 MEIS3Q99687 375 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 LRRC3Q9BY71 257 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 KIAA1683Q9H0B3 1180 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 PORCNQ9H237 461 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 GPR108Q9NPR9 543 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 SMC4Q9NTJ3 1288 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 ZBTB21Q9ULJ3 1066 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 CEP131Q9UPN4 1083 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 ST14Q9Y5Y6 855 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 CAPN6Q9Y6Q1 641 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 FRMPD3Q5JV73 1810 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 FLT1P17948 1338 aa6.22□□□□□ -1.41
R3HDM1-218ENST00000487294 EYSQ5T1H1 3165 aa6.21□□□□□ -1.41
R3HDM1-218ENST00000487294 ZNF236Q9UL36 1845 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 SLC15A5A6NIM6 579 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CHURC1-FNTBB4DL54 471 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CNMDO75829 334 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 GLRX3O76003 335 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CCND3P30281 292 aaPredicted RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CCNA1P78396 465 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 GRB14Q14449 540 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CCL14Q16627 93 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 ATF7IPQ6VMQ6 1270 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 SLFN12Q8IYM2 578 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 FAM9BQ8IZU0 186 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 SH3RF3Q8TEJ3 882 aaPredicted RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CYB5D2Q8WUJ1 264 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 ASB11Q8WXH4 323 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 EDC3Q96F86 508 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 HSPA12BQ96MM6 686 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 BRMS1Q9HCU9 246 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 SEMA3GQ9NS98 782 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 DDX20Q9UHI6 824 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 ADAMTS6Q9UKP5 1117 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 NOB1Q9ULX3 412 aaKnown RBP6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 CDK5RAP2Q96SN8 1893 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 PRUNE2Q8WUY3 3088 aa6.21□□□□□ -1.42
R3HDM1-218ENST00000487294 LTBP2Q14767 1821 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 DBX1A6NMT0 343 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 STRNO43815 780 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 RNASE1P07998 156 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 CYBAP13498 195 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 CYP7A1P22680 504 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 YARSP54577 528 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 USP14P54578 494 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 SMAD3P84022 425 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 FANCCQ00597 558 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 TNK2Q07912 1038 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 ZNF648Q5T619 568 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 CDKAL1Q5VV42 579 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 MFSD14CQ5VZR4 134 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 OLFML2BQ68BL8 750 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 NAA16Q6N069 864 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 CATSPERGQ6ZRH7 1159 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 ADGRA1Q86SQ6 560 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 TGFBRAP1Q8WUH2 860 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 COX4I2Q96KJ9 171 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 Q96M66 194 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 NEUROD6Q96NK8 337 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 LBHD1Q9BQE6 289 aaPredicted RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 NOL10Q9BSC4 688 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 MBNL3Q9NUK0 354 aaKnown RBP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 AATFQ9NY61 560 aaKnown RBP eCLIP6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 UBP1Q9NZI7 540 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 FLRT1Q9NZU1 646 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 RAI14Q9P0K7 980 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 LRP2BPQ9P2M1 347 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 KLHL3Q9UH77 587 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 RLFQ13129 1914 aa6.2□□□□□ -1.42
R3HDM1-218ENST00000487294 PEX10O60683 326 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 ZNF76P36508 570 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 ETV3P41162 512 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 KIR3DL1P43629 444 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 RARSP54136 660 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 IKZF1Q13422 519 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 PKN1Q16512 942 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 SHROOM1Q2M3G4 852 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 GORABQ5T7V8 394 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 CCAR1Q8IX12 1150 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 ABRAQ8N0Z2 381 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 CRACR2BQ8N4Y2 399 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 ARRDC4Q8NCT1 418 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 SHCBP1Q8NEM2 672 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 PI4K2BQ8TCG2 481 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 FAM168AQ92567 244 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 SENP6Q9GZR1 1112 aaPredicted RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 RC3H2Q9HBD1 1191 aaKnown RBP6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 PRDM7Q9NQW5 492 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 NRBP1Q9UHY1 535 aa6.19□□□□□ -1.42
R3HDM1-218ENST00000487294 SERPINB13Q9UIV8 391 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms