RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 USP18Q9UMW8 372 aa6.5□□□□□ -1.37
PRPF38A-203ENST00000487160 GOLGA6CA6NDK9 693 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 GOLGA6BA6NDN3 693 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 GOLGA6DP0CG33 693 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 PFKLP17858 780 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 CYP2C19P33261 490 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 EPHB3P54753 998 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 ITGA1P56199 1179 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 IL13RA1P78552 427 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 CDK17Q00537 523 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 ADAM9Q13443 819 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 RTP5Q14D33 572 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 MLANAQ16655 118 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 MUM1Q2TAK8 710 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 SLC41A1Q8IVJ1 513 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 IGDCC3Q8IVU1 814 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 STPG3Q8N7X2 389 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 RELTQ969Z4 430 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 LRGUKQ96M69 825 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 ZSWIM3Q96MP5 696 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 NOX5Q96PH1 765 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 IFT122Q9HBG6 1241 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 SLC52A1Q9NWF4 448 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 GOLGA6AQ9NYA3 693 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 FTSJ1Q9UET6 329 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 SCRIBQ14160 1630 aa6.49□□□□□ -1.37
PRPF38A-203ENST00000487160 TEX51A0A1B0GUA7 166 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 NDUFS2O75306 463 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 CELA3BP08861 270 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 VCAM1P19320 739 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 IGFBP6P24592 240 aaPredicted RBP6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 SLC5A3P53794 718 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 CCT2P78371 535 aaKnown RBP6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 FOXO4P98177 505 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 CD83Q01151 205 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 PPARAQ07869 468 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 NFATC3Q12968 1075 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 STILQ15468 1287 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 GFOD2Q3B7J2 385 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 KANK2Q63ZY3 851 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 TSPEARQ8WU66 669 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 SSH1Q8WYL5 1049 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 NUP88Q99567 741 aaPredicted RBP6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 PITHD1Q9GZP4 211 aaPredicted RBP6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 PCDH18Q9HCL0 1135 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 FAM53CQ9NYF3 392 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 MAGEL2Q9UJ55 1249 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 TUBD1Q9UJT1 453 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 CROTQ9UKG9 612 aa6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.48□□□□□ -1.37
PRPF38A-203ENST00000487160 A0A0A6YYJ9 748 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 OPHN1O60890 802 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 U2AF1L5P0DN76 240 aaPredicted RBP6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 GNALP38405 381 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 IRAK1P51617 712 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 U2AF1Q01081 240 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■□□□□ 9.7
PRPF38A-203ENST00000487160 SPIDRQ14159 915 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 RRP12Q5JTH9 1297 aaKnown RBP6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 EPM2AIP1Q7L775 607 aaPredicted RBP6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 CCDC146Q8IYE0 955 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 OR14C36Q8NHC7 312 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 GAB3Q8WWW8 586 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 RSAD2Q8WXG1 361 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 CLIP3Q96DZ5 547 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 NOL10Q9BSC4 688 aaKnown RBP6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 C11orf84Q9BUA3 381 aaPredicted RBP6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 GCM1Q9NP62 436 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 ANLNQ9NQW6 1124 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 KCMF1Q9P0J7 381 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 PCDHB6Q9Y5E3 794 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 CDY2AQ9Y6F7 541 aa6.47□□□□□ -1.37
PRPF38A-203ENST00000487160 LRRC10BA6NIK2 292 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 N4BP3O15049 544 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 MAFGO15525 162 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 MAP4K4O95819 1239 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 LPOP22079 712 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 LIMS1P48059 325 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 ADKP55263 362 aaKnown RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 ANTXR2P58335 489 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 KIF23Q02241 960 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 GTF2H3Q13889 308 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 MINDY4Q4G0A6 757 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 MBNL2Q5VZF2 373 aaKnown RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 DPP8Q6V1X1 898 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 MIER2Q8N344 545 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 KYQ8NBH2 561 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 ACE2Q9BYF1 805 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 CSRNP2Q9H175 543 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 KCND1Q9NSA2 647 aa6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 EVLQ9UI08 416 aaPredicted RBP6.46□□□□□ -1.38
PRPF38A-203ENST00000487160 CCDC194A0A1B0GVG4 234 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 VSTM5A8MXK1 200 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 SEMA7AO75326 666 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 AKAP5P24588 427 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 ADCY8P40145 1251 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 SMAD4Q13485 552 aaKnown RBP6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 WDR72Q3MJ13 1102 aa6.45□□□□□ -1.38
PRPF38A-203ENST00000487160 GAREM2Q75VX8 874 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms