RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 KIFAP3Q92845 792 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 SMARCE1Q969G3 411 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 TMEM143Q96AN5 459 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 GSDMAQ96QA5 445 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 POLR3FQ9H1D9 316 aaPredicted RBP10.61□□□□□ -0.71
MCF2L-227ENST00000486806 C17orf75Q9HAS0 396 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 PARVGQ9HBI0 331 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 OLFML3Q9NRN5 406 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 MAN1B1Q9UKM7 699 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 PCDHA2Q9Y5H9 948 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 COL4A3BPQ9Y5P4 624 aa10.61□□□□□ -0.71
MCF2L-227ENST00000486806 ARVCFO00192 962 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 FAM13AO94988 1023 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 PLS3P13797 630 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 IDEP14735 1019 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 GAP43P17677 238 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 GLRA2P23416 452 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 ZSCAN23Q3MJ62 389 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 FAM47CQ5HY64 1035 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 COL13A1Q5TAT6 717 aaPredicted RBP10.6□□□□□ -0.71
MCF2L-227ENST00000486806 IER5Q5VY09 327 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 EFCAB12Q6NXP0 572 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 TAF2Q6P1X5 1199 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 MAEAQ7L5Y9 396 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 RPAINQ86UA6 219 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 SERINC5Q86VE9 423 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 SFR1Q86XK3 245 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 CCDC65Q8IXS2 484 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 FAM126BQ8IXS8 530 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 KIAA0319LQ8IZA0 1049 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 TRIML1Q8N9V2 468 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 TCP11Q8WWU5 503 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 PSPC1Q8WXF1 523 aaKnown RBP10.6□□□□□ -0.71
MCF2L-227ENST00000486806 KCNN1Q92952 543 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 POLD4Q9HCU8 107 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 PANK4Q9NVE7 773 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 RMND1Q9NWS8 449 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 SEL1LQ9UBV2 794 aa10.6□□□□□ -0.71
MCF2L-227ENST00000486806 ADGRA3Q8IWK6 1321 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 MYH9P35579 1960 aaKnown RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 B4GALT4O60513 344 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 CD4P01730 458 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 MAPTP10636 758 aaKnown RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 CYP2C9P11712 490 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 BMP6P22004 513 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 TMOD1P28289 359 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 NAMPTP43490 491 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 NPTX2P47972 431 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 NCKAP1LP55160 1127 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 DMP1Q13316 513 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 CAPSQ13938 189 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 MORC3Q14149 939 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 PTGISQ16647 500 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 FAM26FQ5R3K3 315 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 CDCA2Q69YH5 1023 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 SLC39A5Q6ZMH5 540 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 ANKRD33Q7Z3H0 272 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 METTL13Q8N6R0 699 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 KIAA0895Q8NCT3 520 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 SPIRE2Q8WWL2 714 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 DHX38Q92620 1227 aaKnown RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 WNT8BQ93098 351 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 HPS3Q969F9 1004 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 VTI1AQ96AJ9 217 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 FUCA2Q9BTY2 467 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 STRA6Q9BX79 667 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 FGFBP2Q9BYJ0 223 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 SENP6Q9GZR1 1112 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 C11orf49Q9H6J7 331 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 SUGCTQ9HAC7 445 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 TRMT13Q9NUP7 481 aaKnown RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 EXOC1Q9NV70 894 aa10.59□□□□□ -0.71
MCF2L-227ENST00000486806 LARSQ9P2J5 1176 aaKnown RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 SUCLA2Q9P2R7 463 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-227ENST00000486806 MROH7Q68CQ1 1323 aa10.58□□□□□ -0.71
MCF2L-227ENST00000486806 SYCE3A1L190 88 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 SFI1A8K8P3 1242 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PPP1R37O75864 691 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 LETM1O95202 739 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 RPLP2P05387 115 aaKnown RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 EN2P19622 333 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 DNM2P50570 870 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 GPC3P51654 580 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 CASP5P51878 434 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PEX3P56589 373 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 RBL2Q08999 1139 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 LAMTOR4Q0VGL1 99 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 STK4Q13043 487 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PSMD2Q13200 908 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PTK7Q13308 1070 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 MXD4Q14582 209 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 PPP2R5AQ15172 486 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 TRIM71Q2Q1W2 868 aaKnown RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 COBLL1Q53SF7 1204 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 HERC4Q5GLZ8 1057 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 ODR4Q5SWX8 454 aa10.58□□□□□ -0.72
MCF2L-227ENST00000486806 ZNF658Q5TYW1 1059 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 EPM2AIP1Q7L775 607 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-227ENST00000486806 IFNLR1Q8IU57 520 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms