RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF460Q14592 562 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 TRIM68Q6AZZ1 485 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 LRSAM1Q6UWE0 723 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 RNF180Q86T96 592 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 UBR7Q8N806 425 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 LEO1Q8WVC0 666 aaPredicted RBP6.32□□□□□ -1.4
SMC4-218ENST00000486711 CFHR4Q92496 578 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 EXTL1Q92935 676 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 MENTQ9BUN1 341 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 CELF4Q9BZC1 486 aaKnown RBP6.32□□□□□ -1.4
SMC4-218ENST00000486711 CSRNP2Q9H175 543 aa6.32□□□□□ -1.4
SMC4-218ENST00000486711 FOXP2O15409 715 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 KPNA6O60684 536 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 POU3F2P20265 443 aaPredicted RBP6.31□□□□□ -1.4
SMC4-218ENST00000486711 CDK11BP21127 795 aaKnown RBP6.31□□□□□ -1.4
SMC4-218ENST00000486711 MRE11P49959 708 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 MOGSQ13724 837 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 SEC23AQ15436 765 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 GRAMD4Q6IC98 578 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 ZCCHC8Q6NZY4 707 aaKnown RBP6.31□□□□□ -1.4
SMC4-218ENST00000486711 HIPK4Q8NE63 616 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 ASB15Q8WXK1 588 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 NELFAQ9H3P2 528 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 ING1Q9UK53 422 aaPredicted RBP6.31□□□□□ -1.4
SMC4-218ENST00000486711 ATP8A1Q9Y2Q0 1164 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 ASB1Q9Y576 335 aa6.31□□□□□ -1.4
SMC4-218ENST00000486711 ZNF202O95125 648 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 ACRV1P26436 265 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 SDHAP31040 664 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 FHL2Q14192 279 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 SART3Q15020 963 aaKnown RBP6.3□□□□□ -1.4
SMC4-218ENST00000486711 PIK3R6Q5UE93 754 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 CDCA2Q69YH5 1023 aaPredicted RBP6.3□□□□□ -1.4
SMC4-218ENST00000486711 C1orf210Q8IVY1 113 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 ATL2Q8NHH9 583 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 CALML6Q8TD86 181 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 GBP4Q96PP9 640 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 SAMD15Q9P1V8 674 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 COQ6Q9Y2Z9 468 aa6.3□□□□□ -1.4
SMC4-218ENST00000486711 SLC12A8A0AV02 714 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 PRAMEF22A3QJZ6 481 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 HIP1RO75146 1068 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 MSX2P35548 267 aaPredicted RBP6.29□□□□□ -1.4
SMC4-218ENST00000486711 TGFB2P61812 414 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 FOXL1Q12952 345 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 LSM12Q3MHD2 195 aaKnown RBP6.29□□□□□ -1.4
SMC4-218ENST00000486711 ZNF808Q8N4W9 903 aaPredicted RBP6.29□□□□□ -1.4
SMC4-218ENST00000486711 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.29□□□□□ -1.4
SMC4-218ENST00000486711 CABP5Q9NP86 173 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 PLA2G3Q9NZ20 509 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 FAM184BQ9ULE4 1060 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 B3GALT1Q9Y5Z6 326 aa6.29□□□□□ -1.4
SMC4-218ENST00000486711 PMS2P1A4D2B8 440 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 OVOL3O00110 214 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 MAFO75444 373 aaPredicted RBP6.28□□□□□ -1.4
SMC4-218ENST00000486711 MCM7P33993 719 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 SCNN1BP51168 640 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 HHEXQ03014 270 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 MAP3K12Q12852 859 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 STRN3Q13033 797 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 PCBP1Q15365 356 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMC4-218ENST00000486711 CRB2Q5IJ48 1285 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 DDX42Q86XP3 938 aaKnown RBP eCLIP6.28□□□□□ -1.4
SMC4-218ENST00000486711 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 OR14K1Q8NGZ2 314 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 OR2W6PQ8NHA6 318 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 DLG3Q92796 817 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 USP7Q93009 1102 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 TLR9Q9NR96 1032 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 HOMER2Q9NSB8 354 aa6.28□□□□□ -1.4
SMC4-218ENST00000486711 AURKAIP1Q9NWT8 199 aaPredicted RBP6.28□□□□□ -1.4
SMC4-218ENST00000486711 ALG1L2C9J202 215 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 PLSCR1O15162 318 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 SLC26A4O43511 780 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 APEX1P27695 318 aaKnown RBP6.27□□□□□ -1.41
SMC4-218ENST00000486711 HIBADHP31937 336 aaKnown RBP6.27□□□□□ -1.41
SMC4-218ENST00000486711 STAT5BP51692 787 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 HGFACQ04756 655 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 GRM7Q14831 915 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 DHCR24Q15392 516 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 FSTL4Q6MZW2 842 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 OVCH1Q7RTY7 1134 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 ADGRE4PQ86SQ3 457 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 KIF18BQ86Y91 864 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 AFAP1L2Q8N4X5 818 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 PRPF38AQ8NAV1 312 aaKnown RBP6.27□□□□□ -1.41
SMC4-218ENST00000486711 SHCBP1Q8NEM2 672 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 PLEKHG4BQ96PX9 1271 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 MTFR1LQ9H019 292 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 ZKSCAN5Q9Y2L8 839 aa6.27□□□□□ -1.41
SMC4-218ENST00000486711 RASSF10A6NK89 507 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 GOLGA6L22H0YM25 854 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 M0R2C6 588 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 NARSO43776 548 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 BRINP1O60477 761 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 GAS7O60861 476 aa6.26□□□□□ -1.41
SMC4-218ENST00000486711 GLRX3O76003 335 aaKnown RBP6.26□□□□□ -1.41
SMC4-218ENST00000486711 C1SP09871 688 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms