RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 IGFBP4P22692 258 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 SARSP49591 514 aaKnown RBP17.84■□□□□ 0.45
HDAC8-218ENST00000486704 NPEPPSP55786 919 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 ZNF410Q86VK4 478 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 CEP170P1Q96L14 293 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 RGS18Q9NS28 235 aa17.84■□□□□ 0.45
HDAC8-218ENST00000486704 DENND3A2RUS2 1198 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 RFXAPO00287 272 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 GTPBP6O43824 516 aaPredicted RBP17.83■□□□□ 0.44
HDAC8-218ENST00000486704 POLGP54098 1239 aaPredicted RBP17.83■□□□□ 0.44
HDAC8-218ENST00000486704 GRB10Q13322 594 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 CUL4AQ13619 759 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 DSC3Q14574 896 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 ZNF174Q15697 407 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 SLC24A5Q71RS6 500 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 TPH2Q8IWU9 490 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 ZNF579Q8NAF0 562 aaKnown RBP17.83■□□□□ 0.44
HDAC8-218ENST00000486704 SLC17A8Q8NDX2 589 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 NLRP7Q8WX94 980 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 SCLT1Q96NL6 688 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 ADAM2Q99965 735 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 C17orf80Q9BSJ5 609 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 TUFT1Q9NNX1 390 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 ANKEF1Q9NU02 776 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 LMCD1Q9NZU5 365 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 GTF3C3Q9Y5Q9 886 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 MTCH2Q9Y6C9 303 aa17.83■□□□□ 0.44
HDAC8-218ENST00000486704 C9IYK1 514 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 LINC00271P0C7V0 271 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 EMC2Q15006 297 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 CMTR2Q8IYT2 770 aaKnown RBP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 FIBCD1Q8N539 461 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 C4orf32Q8N8J7 132 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 FBXO22Q8NEZ5 403 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 GDPD5Q8WTR4 605 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 TCP11Q8WWU5 503 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 CLP1Q92989 425 aaKnown RBP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 GCOM2Q9BZD3 368 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 SUCLA2Q9P2R7 463 aaPredicted RBP17.82■□□□□ 0.44
HDAC8-218ENST00000486704 MTUS1Q9ULD2 1270 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 RWDD3Q9Y3V2 267 aa17.82■□□□□ 0.44
HDAC8-218ENST00000486704 LAD1O00515 517 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 SPATA31C1P0DKV0 1188 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 FXR2P51116 673 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 EPC2Q52LR7 807 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 RHPN2Q8IUC4 686 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 PSPC1Q8WXF1 523 aaKnown RBP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 POLR3CQ9BUI4 534 aaPredicted RBP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 INO80BQ9C086 356 aaPredicted RBP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
HDAC8-218ENST00000486704 PCDHB6Q9Y5E3 794 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 COL4A3BPQ9Y5P4 624 aa17.81■□□□□ 0.44
HDAC8-218ENST00000486704 PLXNA4Q9HCM2 1894 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 A0A087WZ62 844 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 C5orf67F2Z3F1 127 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 H3BQV1 296 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 ZBTB39O15060 712 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 DGAT1O75907 488 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 MUTP22033 750 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 SFPQP23246 707 aaKnown RBP eCLIP17.8■□□□□ 0.44
HDAC8-218ENST00000486704 RPA1P27694 616 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 TECP42680 631 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 RARRES1P49788 294 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 FAM189BP81408 668 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 BTG3Q14201 252 aaPredicted RBP17.8■□□□□ 0.44
HDAC8-218ENST00000486704 NBR1Q14596 966 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 RILPL1Q5EBL4 403 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 MCTP1Q6DN14 999 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 TMEM192Q8IY95 271 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 ZNF668Q96K58 619 aaPredicted RBP17.8■□□□□ 0.44
HDAC8-218ENST00000486704 MTRQ99707 1265 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 FDXACB1Q9BRP7 624 aaPredicted RBP17.8■□□□□ 0.44
HDAC8-218ENST00000486704 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.8■□□□□ 0.44
HDAC8-218ENST00000486704 TMEM161AQ9NX61 479 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 LRFN2Q9ULH4 789 aa17.8■□□□□ 0.44
HDAC8-218ENST00000486704 H3BNC9 293 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 ASAP2O43150 1006 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 PRPHP41219 470 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 PTGDRQ13258 359 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 CATSPER3Q86XQ3 398 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 NLRP4Q96MN2 994 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 ATP6V0A4Q9HBG4 840 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 IFT122Q9HBG6 1241 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 XPNPEP1Q9NQW7 623 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 DBR1Q9UK59 544 aaKnown RBP17.79■□□□□ 0.44
HDAC8-218ENST00000486704 PCDHB7Q9Y5E2 793 aa17.79■□□□□ 0.44
HDAC8-218ENST00000486704 MYH15Q9Y2K3 1946 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 MED24O75448 989 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 RB1P06400 928 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 ZSCAN20P17040 1043 aaPredicted RBP17.78■□□□□ 0.44
HDAC8-218ENST00000486704 LAMTOR4Q0VGL1 99 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 PDIA5Q14554 519 aa17.78■□□□□ 0.44
HDAC8-218ENST00000486704 FERMT3Q86UX7 667 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms