RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 C11orf84Q9BUA3 381 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 ZSWIM4Q9H7M6 989 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 TTC12Q9H892 705 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 PRDM6Q9NQX0 595 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 BMP2KQ9NSY1 1161 aaPredicted RBP14.42□□□□□ -0.1
CHMP3-208ENST00000486404 PPME1Q9Y570 386 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 PCDHB7Q9Y5E2 793 aa14.42□□□□□ -0.1
CHMP3-208ENST00000486404 DLL1O00548 723 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 LPXNO60711 386 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 MAFO75444 373 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 DGKIO75912 1065 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 DARSP14868 501 aaKnown RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 ZSCAN20P17040 1043 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 POU3F3P20264 500 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 SFPQP23246 707 aaKnown RBP eCLIP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 EIF4BP23588 611 aaKnown RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 RFC5P40937 340 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 CDC42EP1Q00587 391 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 SPIRE1Q08AE8 756 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 ORC2Q13416 577 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 GPM6BQ13491 265 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 CTTNQ14247 550 aaKnown RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 TIGD5Q53EQ6 642 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 TTC38Q5R3I4 469 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 SLC24A5Q71RS6 500 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 TPH2Q8IWU9 490 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 C4orf19Q8IY42 314 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 CMTR2Q8IYT2 770 aaKnown RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 GCOM2Q9BZD3 368 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 ADAMTS10Q9H324 1103 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 RC3H2Q9HBD1 1191 aaKnown RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 RGL1Q9NZL6 768 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 LMCD1Q9NZU5 365 aa14.41□□□□□ -0.1
CHMP3-208ENST00000486404 SUCLA2Q9P2R7 463 aaPredicted RBP14.41□□□□□ -0.1
CHMP3-208ENST00000486404 PLXNA4Q9HCM2 1894 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 POTEMA6NI47 508 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 WNT7AO00755 349 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 MGEA5O60502 916 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 STBD1O95210 358 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 OR52Z1P0C646 297 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 NPEPPSP55786 919 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 DRP2Q13474 957 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 EMC2Q15006 297 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 XKR9Q5GH70 373 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 SPOUT1Q5T280 376 aaKnown RBP14.4□□□□□ -0.1
CHMP3-208ENST00000486404 RTN4RL1Q86UN2 441 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-208ENST00000486404 ZNF410Q86VK4 478 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 ERMNQ8TAM6 284 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 PSPC1Q8WXF1 523 aaKnown RBP14.4□□□□□ -0.1
CHMP3-208ENST00000486404 EIF2AK1Q9BQI3 630 aaKnown RBP14.4□□□□□ -0.1
CHMP3-208ENST00000486404 RGS18Q9NS28 235 aa14.4□□□□□ -0.1
CHMP3-208ENST00000486404 WRAP73Q9P2S5 460 aaPredicted RBP14.4□□□□□ -0.1
CHMP3-208ENST00000486404 CUL9Q8IWT3 2517 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 IGKV6-21A0A0C4DH24 114 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 H3BNC9 293 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 HOXA2O43364 376 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 GAS2O43903 313 aaKnown RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 TRAPPC10P48553 1259 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 AAK1Q2M2I8 961 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 TJAP1Q5JTD0 557 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 MCTP1Q6DN14 999 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 ABI1Q8IZP0 508 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 RNF169Q8NCN4 708 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 ATXN2LQ8WWM7 1075 aaKnown RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 TCP11Q8WWU5 503 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 ZNF689Q96CS4 500 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 MRPL38Q96DV4 380 aaKnown RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 TMX3Q96JJ7 454 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 INO80BQ9C086 356 aaPredicted RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 ATP6V0A4Q9HBG4 840 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 TMEM161AQ9NX61 479 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 COL4A3BPQ9Y5P4 624 aa14.39□□□□□ -0.11
CHMP3-208ENST00000486404 MRPL42Q9Y6G3 142 aaKnown RBP14.39□□□□□ -0.11
CHMP3-208ENST00000486404 A0A087WZ62 844 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 TBKBP1A7MCY6 615 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 C9IYK1 514 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 H3BQV1 296 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 CSPG5O95196 566 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 RB1P06400 928 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 FGFR4P22455 802 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 GATMP50440 423 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 MRPS5P82675 430 aaKnown RBP14.38□□□□□ -0.11
CHMP3-208ENST00000486404 ZNF174Q15697 407 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 CATSPER4Q7RTX7 472 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 SYMPKQ92797 1274 aaKnown RBP14.38□□□□□ -0.11
CHMP3-208ENST00000486404 CLP1Q92989 425 aaKnown RBP14.38□□□□□ -0.11
CHMP3-208ENST00000486404 TMEM143Q96AN5 459 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 MTMR9Q96QG7 549 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 CEP89Q96ST8 783 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 MTRQ99707 1265 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 FDXACB1Q9BRP7 624 aaPredicted RBP14.38□□□□□ -0.11
CHMP3-208ENST00000486404 TMEM60Q9H2L4 133 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 DACT1Q9NYF0 836 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 COG5Q9UP83 839 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 SMC3Q9UQE7 1217 aa14.38□□□□□ -0.11
CHMP3-208ENST00000486404 PIN4Q9Y237 131 aaKnown RBP14.38□□□□□ -0.11
CHMP3-208ENST00000486404 REV3LO60673 3130 aa14.37□□□□□ -0.11
CHMP3-208ENST00000486404 TCF20Q9UGU0 1960 aaKnown RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 CSDE1O75534 798 aaKnown RBP14.37□□□□□ -0.11
CHMP3-208ENST00000486404 CD2BP2O95400 341 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms