RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 GATMP50440 423 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 CDC42EP1Q00587 391 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 SPIRE1Q08AE8 756 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 TTC38Q5R3I4 469 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 NOSTRINQ8IVI9 506 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 C4orf19Q8IY42 314 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 EXOC8Q8IYI6 725 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 SLC7A3Q8WY07 619 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 TMEM143Q96AN5 459 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 NLRP4Q96MN2 994 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
SNX21-211ENST00000486336 MTMR9Q96QG7 549 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 CEP89Q96ST8 783 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 FDXACB1Q9BRP7 624 aaPredicted RBP12.34□□□□□ -0.43
SNX21-211ENST00000486336 RGS18Q9NS28 235 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 C1orf112Q9NSG2 853 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 ADGRA3Q8IWK6 1321 aa12.34□□□□□ -0.43
SNX21-211ENST00000486336 TTC3P53804 2025 aa12.33□□□□□ -0.43
SNX21-211ENST00000486336 CDH23Q9H251 3354 aa12.33□□□□□ -0.43
SNX21-211ENST00000486336 PRRC2BQ5JSZ5 2229 aaKnown RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 IGKV6-21A0A0C4DH24 114 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 POTEMA6NI47 508 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 TBKBP1A7MCY6 615 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 H3BQV1 296 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 CSPG5O95196 566 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 OR52Z1P0C646 297 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 SRGAP2CP0DJJ0 459 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 DARSP14868 501 aaKnown RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 POU3F3P20264 500 aaPredicted RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 GJB2P29033 226 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 RFC5P40937 340 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 NBR1Q14596 966 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 SPOUT1Q5T280 376 aaKnown RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 SLC24A5Q71RS6 500 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 KSR1Q8IVT5 923 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 RNF169Q8NCN4 708 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 IL27Q8NEV9 243 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 ZNF689Q96CS4 500 aaPredicted RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 ATP6V0A4Q9HBG4 840 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 RNF216Q9NWF9 866 aaPredicted RBP12.33□□□□□ -0.44
SNX21-211ENST00000486336 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 CHD7Q9P2D1 2997 aa12.33□□□□□ -0.44
SNX21-211ENST00000486336 C9IYK1 514 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 BMPR1AP36894 532 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 DSC3Q14574 896 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 EMC2Q15006 297 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 PTPROQ16827 1216 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 FAM102BQ5T8I3 360 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 NEK9Q8TD19 979 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 PIGOQ8TEQ8 1089 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 PRPF31Q8WWY3 499 aaKnown RBP12.32□□□□□ -0.44
SNX21-211ENST00000486336 INO80BQ9C086 356 aaPredicted RBP12.32□□□□□ -0.44
SNX21-211ENST00000486336 LMCD1Q9NZU5 365 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 THEGQ9P2T0 379 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 RWDD3Q9Y3V2 267 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 PPME1Q9Y570 386 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 COL4A3BPQ9Y5P4 624 aa12.32□□□□□ -0.44
SNX21-211ENST00000486336 MRPL42Q9Y6G3 142 aaKnown RBP12.32□□□□□ -0.44
SNX21-211ENST00000486336 H3BNC9 293 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 SFPQP23246 707 aaKnown RBP eCLIP12.31□□□□□ -0.44
SNX21-211ENST00000486336 TRAPPC10P48553 1259 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
SNX21-211ENST00000486336 CATSPER4Q7RTX7 472 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 ZNF410Q86VK4 478 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 CMTR2Q8IYT2 770 aaKnown RBP12.31□□□□□ -0.44
SNX21-211ENST00000486336 ERMNQ8TAM6 284 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 PSPC1Q8WXF1 523 aaKnown RBP12.31□□□□□ -0.44
SNX21-211ENST00000486336 MTRQ99707 1265 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 HSD17B14Q9BPX1 270 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 BACH2Q9BYV9 841 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 DHX33Q9H6R0 707 aaKnown RBP12.31□□□□□ -0.44
SNX21-211ENST00000486336 ANKEF1Q9NU02 776 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
SNX21-211ENST00000486336 GTF3C3Q9Y5Q9 886 aa12.31□□□□□ -0.44
SNX21-211ENST00000486336 MED24O75448 989 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 RB1P06400 928 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 FGFR1P11362 822 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 U2AF2P26368 475 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX21-211ENST00000486336 FAM189BP81408 668 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 MRPS5P82675 430 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 LAMTOR4Q0VGL1 99 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 ORC2Q13416 577 aaPredicted RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 LARP1BQ659C4 914 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 EP400NLQ6ZTU2 488 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 MAEAQ7L5Y9 396 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 ECHDC2Q86YB7 292 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 CRIPAKQ8N1N5 446 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 MRPL38Q96DV4 380 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 C11orf84Q9BUA3 381 aaPredicted RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 RC3H2Q9HBD1 1191 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 ALG13Q9NP73 1137 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 PIN4Q9Y237 131 aaKnown RBP12.3□□□□□ -0.44
SNX21-211ENST00000486336 PCDHB6Q9Y5E3 794 aa12.3□□□□□ -0.44
SNX21-211ENST00000486336 COL4A4P53420 1690 aaPredicted RBP12.29□□□□□ -0.44
SNX21-211ENST00000486336 EYSQ5T1H1 3165 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 GRM6O15303 877 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 ASAP2O43150 1006 aa12.29□□□□□ -0.44
SNX21-211ENST00000486336 GAS2O43903 313 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms