RNA–Protein interactions for RNA: ENST00000486311.5

SREBF1-214, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 473 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-214ENST00000486311 CEP89Q96ST8 783 aa25.23■■□□□ 1.63
SREBF1-214ENST00000486311 PHF20Q9BVI0 1012 aa25.23■■□□□ 1.63
SREBF1-214ENST00000486311 TMEM117Q9H0C3 514 aa25.23■■□□□ 1.63
SREBF1-214ENST00000486311 C11orf16Q9NQ32 467 aa25.23■■□□□ 1.63
SREBF1-214ENST00000486311 SEPT9Q9UHD8 586 aaPredicted RBP25.23■■□□□ 1.63
SREBF1-214ENST00000486311 HOXA2O43364 376 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 PFKFB2O60825 505 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 SMAD2Q15796 467 aaKnown RBP25.22■■□□□ 1.63
SREBF1-214ENST00000486311 CLUL1Q15846 466 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 CSPP1Q1MSJ5 1256 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 ADHFE1Q8IWW8 467 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 EFHBQ8N7U6 833 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 ZNF668Q96K58 619 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-214ENST00000486311 SLKQ9H2G2 1235 aaPredicted RBP25.22■■□□□ 1.63
SREBF1-214ENST00000486311 CWH43Q9H720 699 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 HCSTQ9UBK5 93 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 TPCN1Q9ULQ1 816 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 LOXHD1Q8IVV2 1947 aa25.22■■□□□ 1.63
SREBF1-214ENST00000486311 IGKV6-21A0A0C4DH24 114 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 C19orf67A6NJJ6 358 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 MBTPS2O43462 519 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 SLC37A4O43826 429 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 FGF18O76093 207 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 CDC42EP1Q00587 391 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 DRP2Q13474 957 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 SMAD4Q13485 552 aaKnown RBP25.21■■□□□ 1.63
SREBF1-214ENST00000486311 LETM2Q2VYF4 491 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 MTERF2Q49AM1 385 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 COLGALT1Q8NBJ5 622 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 NLRP7Q8WX94 980 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 FAM122AQ96E09 287 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 SCLT1Q96NL6 688 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 RNF19AQ9NV58 838 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 CD207Q9UJ71 328 aa25.21■■□□□ 1.63
SREBF1-214ENST00000486311 CCDC194A0A1B0GVG4 234 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 TMEM150BA6NC51 233 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 LAG3P18627 525 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 NRIP1P48552 1158 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 NDUFV1P49821 464 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 ANAPC15P60006 121 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 PPP4R3AQ6IN85 833 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 ECHDC2Q86YB7 292 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 MSLNLQ96KJ4 702 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 CASD1Q96PB1 797 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 PCDHGC5Q9Y5F6 944 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 EVPLQ92817 2033 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 MYH9P35579 1960 aaKnown RBP25.2■■□□□ 1.62
SREBF1-214ENST00000486311 ATG2AQ2TAZ0 1938 aa25.2■■□□□ 1.62
SREBF1-214ENST00000486311 ALADP13716 330 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 XBP1P17861 261 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 PSMC5P62195 406 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 NEK8Q86SG6 692 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 THNSL1Q8IYQ7 743 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 FAM20AQ96MK3 541 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 GCOM2Q9BZD3 368 aaPredicted RBP25.19■■□□□ 1.62
SREBF1-214ENST00000486311 KCNMB3Q9NPA1 279 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 TLR9Q9NR96 1032 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 CLEC1BQ9P126 229 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 VAV3Q9UKW4 847 aa25.19■■□□□ 1.62
SREBF1-214ENST00000486311 A0A0U1RQF3 1178 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 FAM86C2PA6NEL3 165 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 DDX11L8A8MPP1 907 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 EYA4O95677 639 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 GCFC2P16383 781 aaKnown RBP25.18■■□□□ 1.62
SREBF1-214ENST00000486311 FGFR4P22455 802 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 PPP2R5CQ13362 524 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 LRRC55Q6ZSA7 311 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 ANO5Q75V66 913 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 RBM23Q86U06 439 aaKnown RBP25.18■■□□□ 1.62
SREBF1-214ENST00000486311 MICAL1Q8TDZ2 1067 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 SH2D3AQ9BRG2 576 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 PPP4R2Q9NY27 417 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 LZTS1Q9Y250 596 aa25.18■■□□□ 1.62
SREBF1-214ENST00000486311 KIAA1671Q9BY89 1806 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 EML1O00423 815 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 MAFO75444 373 aaPredicted RBP25.17■■□□□ 1.62
SREBF1-214ENST00000486311 CTDNEP1O95476 244 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 DNM2P50570 870 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 ERVFC1P60507 584 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 PLCB3Q01970 1234 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 ANKRD1Q15327 319 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 PDE12Q6L8Q7 609 aaKnown RBP25.17■■□□□ 1.62
SREBF1-214ENST00000486311 ZNF598Q86UK7 904 aaKnown RBP25.17■■□□□ 1.62
SREBF1-214ENST00000486311 ABI1Q8IZP0 508 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 LRRC43Q8N309 656 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 POP1Q99575 1024 aaKnown RBP25.17■■□□□ 1.62
SREBF1-214ENST00000486311 TLE6Q9H808 572 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 GJB4Q9NTQ9 266 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 DACT1Q9NYF0 836 aa25.17■■□□□ 1.62
SREBF1-214ENST00000486311 ARIH1Q9Y4X5 557 aaPredicted RBP25.17■■□□□ 1.62
SREBF1-214ENST00000486311 FSCN2O14926 492 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 GLP2RO95838 553 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 EOMESO95936 686 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 COASYQ13057 564 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 OXER1Q8TDS5 423 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 NAP1L4Q99733 375 aaKnown RBP25.16■■□□□ 1.62
SREBF1-214ENST00000486311 JPH2Q9BR39 696 aaPredicted RBP25.16■■□□□ 1.62
SREBF1-214ENST00000486311 CHST12Q9NRB3 414 aa25.16■■□□□ 1.62
SREBF1-214ENST00000486311 SUCLA2Q9P2R7 463 aaPredicted RBP25.16■■□□□ 1.62
SREBF1-214ENST00000486311 A0A087WZ62 844 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms