RNA–Protein interactions for RNA: ENST00000486032.1

COPS3-208, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-208ENST00000486032 TBC1D22BQ9NU19 505 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 GABBR1Q9UBS5 961 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 LRWD1Q9UFC0 647 aa6.32□□□□□ -1.4
COPS3-208ENST00000486032 NFASCO94856 1347 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ELP1O95163 1332 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 TCHHQ07283 1943 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 GOLGA6L4A6NEF3 574 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 WDR64B1ANS9 1081 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PIK3R2O00459 728 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 LAD1O00515 517 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ADAMTS4O75173 837 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PSMD10O75832 226 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SGPL1O95470 568 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 LGALS2P05162 132 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ASGR1P07306 291 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PSAPP07602 524 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 MMP3P08254 477 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SUPT20HL2P0C7V6 817 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 MX2P20592 715 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 CCT6AP40227 531 aaKnown RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 CHRNA4P43681 627 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 NASPP49321 788 aaPredicted RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 JAK3P52333 1124 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 GJA9P57773 515 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PSMC6P62333 389 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 RELBQ01201 579 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SLC39A14Q15043 492 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 IL17AQ16552 155 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 DGKDQ16760 1214 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 FAM47CQ5HY64 1035 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SMYD5Q6GMV2 418 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ZNF746Q6NUN9 644 aaPredicted RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 MIS18BP1Q6P0N0 1132 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PDXDC2PQ6P474 469 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 LYPD8Q6UX82 237 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 CXCL17Q6UXB2 119 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 TPH2Q8IWU9 490 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 KRI1Q8N9T8 703 aaKnown RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 ARRDC4Q8NCT1 418 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PPTC7Q8NI37 304 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ERMNQ8TAM6 284 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SNX29Q8TEQ0 813 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 LEO1Q8WVC0 666 aaPredicted RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 RIT2Q99578 217 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 EIF2AK1Q9BQI3 630 aaKnown RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 SH2D3AQ9BRG2 576 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 OXCT2Q9BYC2 517 aaPredicted RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 RAB34Q9BZG1 259 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 AZI2Q9H6S1 392 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 ZNF302Q9NR11 478 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 POLR3EQ9NVU0 708 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 RGL1Q9NZL6 768 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 FBXO2Q9UK22 296 aaPredicted RBP6.31□□□□□ -1.4
COPS3-208ENST00000486032 VAV3Q9UKW4 847 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PCDHA7Q9UN72 937 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 Q9Y3F1 56 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 PCDHA10Q9Y5I2 948 aa6.31□□□□□ -1.4
COPS3-208ENST00000486032 SHISA8B8ZZ34 492 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 CUTAO60888 179 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PRPF40AO75400 957 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 MED24O75448 989 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 SSBP05455 408 aaKnown RBP eCLIP6.3□□□□□ -1.4
COPS3-208ENST00000486032 GJB1P08034 283 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 SFNP31947 248 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PRPHP41219 470 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 UBA7P41226 1012 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 GJA8P48165 433 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 STAT5BP51692 787 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 ACLYP53396 1101 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 IGBP1P78318 339 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PPP2R5CQ13362 524 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 DHX8Q14562 1220 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 EPHA7Q15375 998 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 UGCGQ16739 394 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PRPF38BQ5VTL8 546 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 FAM160B1Q5W0V3 765 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 KRT79Q5XKE5 535 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 ARL6IP4Q66PJ3 421 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 ATL3Q6DD88 541 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 ABHD15Q6UXT9 468 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 USP49Q70CQ1 688 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 CABP7Q86V35 215 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 CCDC60Q8IWA6 550 aaPredicted RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 SMAP1Q8IYB5 467 aaPredicted RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 PDILTQ8N807 584 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PCSK9Q8NBP7 692 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 KCNG4Q8TDN1 519 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 EPSTI1Q96J88 318 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 CDK5RAP3Q96JB5 506 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 CCDC43Q96MW1 224 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 GBP4Q96PP9 640 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 SENP6Q9GZR1 1112 aaPredicted RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 SCAND2PQ9GZW5 306 aaPredicted RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 UPF3AQ9H1J1 476 aaKnown RBP6.3□□□□□ -1.4
COPS3-208ENST00000486032 SUV39H2Q9H5I1 410 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 STARD7Q9NQZ5 370 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 MAP10Q9P2G4 905 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 RCOR1Q9UKL0 485 aa6.3□□□□□ -1.4
COPS3-208ENST00000486032 ZNF215Q9UL58 517 aaPredicted RBP6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms