RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-208ENST00000485820 TRANK1O15050 2925 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 POTEMA6NI47 508 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 LINC00271P0C7V0 271 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 XRCC6P12956 609 aaKnown RBP eCLIP16.75■□□□□ 0.27
YIF1A-208ENST00000485820 SARSP49591 514 aaKnown RBP16.75■□□□□ 0.27
YIF1A-208ENST00000485820 CUL4AQ13619 759 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 NBR1Q14596 966 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 CCDC85BQ15834 202 aaPredicted RBP16.75■□□□□ 0.27
YIF1A-208ENST00000485820 XKR9Q5GH70 373 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 SLC24A5Q71RS6 500 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 NPAS4Q8IUM7 802 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 KSR1Q8IVT5 923 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 PPM1EQ8WY54 764 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
YIF1A-208ENST00000485820 C1orf112Q9NSG2 853 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 NOL7Q9UMY1 257 aaKnown RBP16.75■□□□□ 0.27
YIF1A-208ENST00000485820 SMC3Q9UQE7 1217 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 PCDHB6Q9Y5E3 794 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 NLRC5Q86WI3 1866 aa16.75■□□□□ 0.27
YIF1A-208ENST00000485820 A0A087WWV3 80 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 A0A087WZ62 844 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 CSDE1O75534 798 aaKnown RBP16.74■□□□□ 0.27
YIF1A-208ENST00000485820 OR52Z1P0C646 297 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 RFC5P40937 340 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 CATSPER3Q86XQ3 398 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 RHPN2Q8IUC4 686 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 FIBCD1Q8N539 461 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 NLRP7Q8WX94 980 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 SAMD11Q96NU1 681 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 FDXACB1Q9BRP7 624 aaPredicted RBP16.74■□□□□ 0.27
YIF1A-208ENST00000485820 ANKEF1Q9NU02 776 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.74■□□□□ 0.27
YIF1A-208ENST00000485820 ARID2Q68CP9 1835 aa16.74■□□□□ 0.27
YIF1A-208ENST00000485820 DENND3A2RUS2 1198 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 MED24O75448 989 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 STAG3L1P0CL83 205 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 FGFR4P22455 802 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 POLGP54098 1239 aaPredicted RBP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 PTGDRQ13258 359 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 ZNF410Q86VK4 478 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 TMEM192Q8IY95 271 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 FBXO22Q8NEZ5 403 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 GDPD5Q8WTR4 605 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 PRPF31Q8WWY3 499 aaKnown RBP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 CLP1Q92989 425 aaKnown RBP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 GCOM2Q9BZD3 368 aaPredicted RBP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 IFT122Q9HBG6 1241 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 TUFT1Q9NNX1 390 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 PRDM6Q9NQX0 595 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 LMCD1Q9NZU5 365 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 PCDHB7Q9Y5E2 793 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 RALGAPA2Q2PPJ7 1873 aa16.73■□□□□ 0.27
YIF1A-208ENST00000485820 FNDC1Q4ZHG4 1894 aaPredicted RBP16.73■□□□□ 0.27
YIF1A-208ENST00000485820 ADGRA3Q8IWK6 1321 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 GTPBP6O43824 516 aaPredicted RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 RARRES1P49788 294 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 FXR2P51116 673 aaKnown RBP eCLIP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 BTG3Q14201 252 aaPredicted RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 PDIA5Q14554 519 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 LARP1BQ659C4 914 aaKnown RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 MCTP1Q6DN14 999 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 CMTR2Q8IYT2 770 aaKnown RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 PIGOQ8TEQ8 1089 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 SCLT1Q96NL6 688 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 POLR3CQ9BUI4 534 aaPredicted RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 ELAC1Q9H777 363 aaKnown RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 XPNPEP1Q9NQW7 623 aa16.72■□□□□ 0.27
YIF1A-208ENST00000485820 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 COL4A4P53420 1690 aaPredicted RBP16.72■□□□□ 0.27
YIF1A-208ENST00000485820 C5orf67F2Z3F1 127 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 H3BNC9 293 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 H3BQV1 296 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 ASAP2O43150 1006 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 GAS2O43903 313 aaKnown RBP16.71■□□□□ 0.27
YIF1A-208ENST00000485820 ZSCAN20P17040 1043 aaPredicted RBP16.71■□□□□ 0.27
YIF1A-208ENST00000485820 RPA1P27694 616 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 BMPR1AP36894 532 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 GATMP50440 423 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 LAMTOR4Q0VGL1 99 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 EMC2Q15006 297 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 IL17AQ16552 155 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 FAM102BQ5T8I3 360 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 FERMT3Q86UX7 667 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 TCP11Q8WWU5 503 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 PSPC1Q8WXF1 523 aaKnown RBP16.71■□□□□ 0.27
YIF1A-208ENST00000485820 NLRP4Q96MN2 994 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 INO80BQ9C086 356 aaPredicted RBP16.71■□□□□ 0.27
YIF1A-208ENST00000485820 BMP2KQ9NSY1 1161 aaPredicted RBP16.71■□□□□ 0.27
YIF1A-208ENST00000485820 TMEM161AQ9NX61 479 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 LRFN2Q9ULH4 789 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 COL4A3BPQ9Y5P4 624 aa16.71■□□□□ 0.27
YIF1A-208ENST00000485820 MYO7AQ13402 2215 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 DGAT1O75907 488 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 RB1P06400 928 aa16.7■□□□□ 0.26
YIF1A-208ENST00000485820 SRGAP2CP0DJJ0 459 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms