RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	PDIA3	P30101	505 aa	Known RBP	11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	NBL1	P41271	181 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	NFX1	Q12986	1120 aa	Known RBP	11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	PAK2	Q13177	524 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	NTRK3	Q16288	839 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	MIS18BP1	Q6P0N0	1132 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	NIPA1	Q7RTP0	329 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	ERMP1	Q7Z2K6	904 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	TEX2	Q8IWB9	1127 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	CKAP2L	Q8IYA6	745 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	REXO1	Q8N1G1	1221 aa	Known RBP	11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	TMEM105	Q8N8V8	129 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	CCDC12	Q8WUD4	166 aa	Predicted RBP	11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	CRYGN	Q8WXF5	182 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	ZNF577	Q9BSK1	485 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	CDHR5	Q9HBB8	845 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	VPS54	Q9P1Q0	977 aa		11.99	□□□□□ -0.49
HMGN1-215	ENST00000485550	ESYT2	A0FGR8	921 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	REC8	O95072	547 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	GNA11	P29992	359 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	SLC26A2	P50443	739 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	KRT76	Q01546	638 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	DUSP6	Q16828	381 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	SPOUT1	Q5T280	376 aa	Known RBP	11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	FRMD5	Q7Z6J6	570 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	NPAS4	Q8IUM7	802 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	KIAA0319L	Q8IZA0	1049 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	CRIPAK	Q8N1N5	446 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	KREMEN2	Q8NCW0	462 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	ATP8B4	Q8TF62	1192 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	RNF25	Q96BH1	459 aa	Predicted RBP	11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	SMOC2	Q9H3U7	446 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	TSHZ2	Q9NRE2	1034 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	CDH22	Q9UJ99	828 aa		11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	MYH9	P35579	1960 aa	Known RBP	11.98	□□□□□ -0.49
HMGN1-215	ENST00000485550	IGSF9B	Q9UPX0	1349 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	RPLP2	P05387	115 aa	Known RBP	11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	STAG3L1	P0CL83	205 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TEC	P42680	631 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	NLRP5	P59047	1200 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	ERVFC1	P60507	584 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TOB2	Q14106	344 aa	Predicted RBP	11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	LLGL2	Q6P1M3	1020 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	ADSSL1	Q8N142	457 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	NME8	Q8N427	588 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	METTL13	Q8N6R0	699 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	NKD2	Q969F2	451 aa	Predicted RBP	11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	GJA10	Q969M2	543 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	FTHL17	Q9BXU8	183 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	RNF26	Q9BY78	433 aa	Predicted RBP	11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	AGXT2	Q9BYV1	514 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	S1PR5	Q9H228	398 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TMX1	Q9H3N1	280 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TBC1D22B	Q9NU19	505 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	HCST	Q9UBK5	93 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	GABBR1	Q9UBS5	961 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TCEAL9	Q9UHQ7	104 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	NOC2L	Q9Y3T9	749 aa	Known RBP	11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	SAMM50	Q9Y512	469 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	WDR87	Q6ZQQ6	2873 aa		11.97	□□□□□ -0.49
HMGN1-215	ENST00000485550	TPR	P12270	2363 aa	Known RBP	11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	SNPH	O15079	494 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	EDIL3	O43854	480 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	MGEA5	O60502	916 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	RPS6KA5	O75582	802 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	BRD1	O95696	1058 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	IFNAR1	P17181	557 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	SET	Q01105	290 aa	Predicted RBP	11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	STK3	Q13188	491 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	KIZ	Q2M2Z5	673 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	ZNF484	Q5JVG2	852 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	PLPP4	Q5VZY2	271 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	MCTP2	Q6DN12	878 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	ANKRD54	Q6NXT1	300 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	SYCE2	Q6PIF2	218 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	RUFY3	Q7L099	469 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	FBXL16	Q8N461	479 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	CCDC148	Q8NFR7	591 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	BICD2	Q8TD16	824 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	TMEM40	Q8WWA1	233 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	ZSWIM6	Q9HCJ5	1215 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	LRFN2	Q9ULH4	789 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	ST3GAL5	Q9UNP4	418 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	PCDHB12	Q9Y5F1	795 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	PCDHA10	Q9Y5I2	948 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	SQOR	Q9Y6N5	450 aa		11.96	□□□□□ -0.49
HMGN1-215	ENST00000485550	C2orf16	Q68DN1	1984 aa		11.96	□□□□□ -0.5
HMGN1-215	ENST00000485550	WDR81	Q562E7	1941 aa		11.96	□□□□□ -0.5
HMGN1-215	ENST00000485550	TBKBP1	A7MCY6	615 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	ZBTB42	B2RXF5	422 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	CHMP2A	O43633	222 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	DTNB	O60941	627 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	FGF18	O76093	207 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	C22orf31	O95567	290 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	VTN	P04004	478 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	PSAP	P07602	524 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	CIITA	P33076	1130 aa		11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	SSRP1	Q08945	709 aa	Known RBP	11.95	□□□□□ -0.5
HMGN1-215	ENST00000485550	MTMR3	Q13615	1198 aa		11.95	□□□□□ -0.5

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