RNA–Protein interactions for RNA: ENST00000485476.2

LDLRAP1-206, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 5

Gene LDLRAP1, Length 238 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-206ENST00000485476 CHST12Q9NRB3 414 aa13.51□□□□□ -0.25
LDLRAP1-206ENST00000485476 PCDHGC5Q9Y5F6 944 aa13.51□□□□□ -0.25
LDLRAP1-206ENST00000485476 WDR64B1ANS9 1081 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 FGFR1P11362 822 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 SKIP12755 728 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 POLGP54098 1239 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 FOXK2Q01167 660 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 PLPP4Q5VZY2 271 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 EFCAB12Q6NXP0 572 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZNF598Q86UK7 904 aaKnown RBP13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 SLC39A11Q8N1S5 342 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 PLCD3Q8N3E9 789 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 FAM217BQ9NTX9 383 aaPredicted RBP13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 RNF19AQ9NV58 838 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 DZANK1Q9NVP4 752 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 SORCS3Q9UPU3 1222 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 USTQ9Y2C2 406 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 IRAK3Q9Y616 596 aa13.5□□□□□ -0.25
LDLRAP1-206ENST00000485476 GOLGA8AA7E2F4 631 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 GOLGA8BA8MQT2 603 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 VTNP04004 478 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 DARSP14868 501 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 SFNP31947 248 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 ALDH7A1P49419 539 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 USP11P51784 963 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 NLRP11P59045 1033 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 MTMR3Q13615 1198 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 RAB11FIP4Q86YS3 637 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZDHHC14Q8IZN3 488 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 REXO1Q8N1G1 1221 aaKnown RBP13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 FBXL16Q8N461 479 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 RDM1Q8NG50 284 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 RIT2Q99578 217 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 BRPF3Q9ULD4 1205 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 AKT3Q9Y243 479 aa13.49□□□□□ -0.25
LDLRAP1-206ENST00000485476 C2orf71A6NGG8 1288 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 HIDE1A8MVS5 230 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 PRPF3O43395 683 aaKnown RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 GALR2O43603 387 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 OATP04181 439 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 GPC3P51654 580 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 JAK3P52333 1124 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 COL9A3Q14050 684 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 JAKMIP3Q5VZ66 844 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZBTB33Q86T24 672 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 PPFIBP1Q86W92 1011 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 KREMEN2Q8NCW0 462 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 ATOH1Q92858 354 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 SNX27Q96L92 541 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 C22orf23Q9BZE7 217 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 INO80BQ9C086 356 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 DISC1Q9NRI5 854 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 GABBR1Q9UBS5 961 aa13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 FNDC1Q4ZHG4 1894 aaPredicted RBP13.48□□□□□ -0.25
LDLRAP1-206ENST00000485476 NID2Q14112 1375 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 KLF18A0A0U1RQI7 1052 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 GFRA3O60609 400 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 IBSPP21815 317 aaPredicted RBP13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 CLCN3P51790 818 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 VCPP55072 806 aaKnown RBP13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 BMP2KLQ5H9B9 411 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 CLLU1OSQ5K130 101 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 ATAT1Q5SQI0 421 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 CCDC148Q8NFR7 591 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 PHOX2BQ99453 314 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 GCOM2Q9BZD3 368 aaPredicted RBP13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 HCFC2Q9Y5Z7 792 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 KIAA1671Q9BY89 1806 aa13.47□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZNF623O75123 536 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 CXCL14O95715 111 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 CDC27P30260 824 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 ADD1P35611 737 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 DNM2P50570 870 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 METAP2P50579 478 aaKnown RBP eCLIP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 CLCN5P51795 746 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 RBM10P98175 930 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 TBC1D8BQ0IIM8 1120 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 TARBP2Q15633 366 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 PRR16Q569H4 304 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 KIAA1841Q6NSI8 718 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 DDX53Q86TM3 631 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 ZNF410Q86VK4 478 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 LENG9Q96B70 501 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 JPH2Q9BR39 696 aaPredicted RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 NIFKQ9BYG3 293 aaKnown RBP13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 SAMM50Q9Y512 469 aa13.46□□□□□ -0.25
LDLRAP1-206ENST00000485476 PTPRZ1P23471 2315 aaPredicted RBP13.46□□□□□ -0.26
LDLRAP1-206ENST00000485476 USP34Q70CQ2 3546 aa13.45□□□□□ -0.26
LDLRAP1-206ENST00000485476 PLXNA4Q9HCM2 1894 aa13.45□□□□□ -0.26
LDLRAP1-206ENST00000485476 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms