RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 PRKD3O94806 890 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 KCNH1O95259 989 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 CELF2O95319 508 aaKnown RBP6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 BMP4P12644 408 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 GYG1P46976 350 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 GMPSP49915 693 aaPredicted RBP6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 TFCP2Q12800 502 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 GRAMD1BQ3KR37 738 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 MINDY4Q4G0A6 757 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 GPAT2Q6NUI2 795 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 FBXO46Q6PJ61 603 aaPredicted RBP6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 ZGPATQ8N5A5 531 aaKnown RBP6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 TNFRSF25Q93038 417 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 MRGPRX3Q96LB0 322 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 DCTPP1Q9H773 170 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 CRTAC1Q9NQ79 661 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 RAD18Q9NS91 495 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 SAMD15Q9P1V8 674 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 WHRNQ9P202 907 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 PGAP2Q9UHJ9 254 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 TAGLN3Q9UI15 199 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 HDAC9Q9UKV0 1011 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 DENND2AQ9ULE3 1009 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 EMC9Q9Y3B6 208 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 MYH13Q9UKX3 1938 aa6.58□□□□□ -1.36
NHLRC3-205ENST00000485407 SALL1Q9NSC2 1324 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 POLR2AP24928 1970 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ARAP2Q8WZ64 1704 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 H0YGN5 161 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 FSCN2O14926 492 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 FRAT2O75474 233 aaPredicted RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CRTAMO95727 393 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 MT-CO1P00395 513 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 IGHA1P01876 353 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CAPNS1P04632 268 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 UQCRFS1P1P0C7P4 283 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 PF4V1P10720 104 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CD247P20963 164 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 EPS15P42566 896 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 DGKGP49619 791 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 TIMM10P62072 90 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 SF1Q15637 639 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CCDC158Q5M9N0 1113 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 HP1BP3Q5SSJ5 553 aaPredicted RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ZBTB37Q5TC79 503 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ZCCHC8Q6NZY4 707 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 USP53Q70EK8 1073 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 MAMDC2Q7Z304 686 aaPredicted RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 DDX53Q86TM3 631 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 TRIM59Q8IWR1 403 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 MRPL41Q8IXM3 137 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 IFNL3Q8IZI9 196 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CLASRPQ8N2M8 674 aaKnown RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 NXPE1Q8N323 547 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 PAF1Q8N7H5 531 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 GALNT6Q8NCL4 622 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 PJA1Q8NG27 643 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ZNF507Q8TCN5 953 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 USP33Q8TEY7 942 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 NUDT8Q8WV74 236 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 TTC9Q92623 222 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 BRF1Q92994 677 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 WNT8BQ93098 351 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 CLIP3Q96DZ5 547 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 FUBP3Q96I24 572 aaKnown RBP eCLIP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 MENTQ9BUN1 341 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 SARGQ9BW04 601 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ANKRD6Q9Y2G4 727 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 TRAF6Q9Y4K3 522 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 FPGT-TNNI3KV9GXZ4 949 aa6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 ZNF646O15015 1829 aaPredicted RBP6.57□□□□□ -1.36
NHLRC3-205ENST00000485407 MAST3O60307 1309 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 ZNF891A8MT65 544 aaPredicted RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 FANCGO15287 622 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 SNRPB2P08579 225 aaKnown RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 ITGA4P13612 1032 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 NLRP12P59046 1061 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 ERVK-24P63145 666 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 SNRPNP63162 240 aaKnown RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 KIF23Q02241 960 aaPredicted RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 RING1Q06587 406 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 RAPGEF1Q13905 1077 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 SUZ12Q15022 739 aaKnown RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 NTRK3Q16288 839 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 ATP13A4Q4VNC1 1196 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 COBLL1Q53SF7 1204 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 GTF2IRD2BQ6EKJ0 949 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 CDC37L1Q7L3B6 337 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 GTF2IRD2Q86UP8 949 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 SPICE1Q8N0Z3 855 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 GOLGA6L1Q8N7Z2 621 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 EDARADDQ8WWZ3 215 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 EAF2Q96CJ1 260 aaPredicted RBP6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 FAM122AQ96E09 287 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 NEUROD6Q96NK8 337 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 WDR18Q9BV38 432 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 LRRCC1Q9C099 1032 aa6.56□□□□□ -1.36
NHLRC3-205ENST00000485407 RWDD1Q9H446 243 aaPredicted RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms