RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 NPIPB8E9PQR5 432 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 PPP1R12AO14974 1030 aaPredicted RBP6.08□□□□□ -1.44
SMC4-215ENST00000484799 RGS3P49796 1198 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 BCAR1P56945 870 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 TCEA2Q15560 299 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 LSM12Q3MHD2 195 aaKnown RBP6.08□□□□□ -1.44
SMC4-215ENST00000484799 CCDC144BQ3MJ40 725 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 FSTL4Q6MZW2 842 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 C7orf31Q8N865 590 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 RABGGTAQ92696 567 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
SMC4-215ENST00000484799 RPL10LQ96L21 214 aaKnown RBP6.08□□□□□ -1.44
SMC4-215ENST00000484799 MPHOSPH9Q99550 1183 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 SLC6A15Q9H2J7 730 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 TLR9Q9NR96 1032 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 TOMM22Q9NS69 142 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 KCMF1Q9P0J7 381 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 MAGEC2Q9UBF1 373 aaPredicted RBP6.08□□□□□ -1.44
SMC4-215ENST00000484799 RCAN3Q9UKA8 241 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 GIT1Q9Y2X7 761 aa6.08□□□□□ -1.44
SMC4-215ENST00000484799 PMS2P1A4D2B8 440 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 MCM7P33993 719 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 BPIFB4P59827 614 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 RIN1Q13671 783 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 MAMDC4Q6UXC1 1216 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 HOMER1Q86YM7 354 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 ZZZ3Q8IYH5 903 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 ANKRD35Q8N283 1001 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 ZNF808Q8N4W9 903 aaPredicted RBP6.07□□□□□ -1.44
SMC4-215ENST00000484799 ARL8AQ96BM9 186 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 FOXRED1Q96CU9 486 aaPredicted RBP6.07□□□□□ -1.44
SMC4-215ENST00000484799 DYDC2Q96IM9 177 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 SCAND2PQ9GZW5 306 aaPredicted RBP6.07□□□□□ -1.44
SMC4-215ENST00000484799 NCDNQ9UBB6 729 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 B4GALT6Q9UBX8 382 aa6.07□□□□□ -1.44
SMC4-215ENST00000484799 MATN2O00339 956 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 DNAJC8O75937 253 aaPredicted RBP6.06□□□□□ -1.44
SMC4-215ENST00000484799 SLC9A1P19634 815 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 PTH1RQ03431 593 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 ADCY2Q08462 1091 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 ABHD18Q0P651 414 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 PABPC4Q13310 644 aaKnown RBP eCLIP6.06□□□□□ -1.44
SMC4-215ENST00000484799 SQSTM1Q13501 440 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 CNGB1Q14028 1251 aaPredicted RBP6.06□□□□□ -1.44
SMC4-215ENST00000484799 ZNF460Q14592 562 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 ZNF662Q6ZS27 426 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 Q6ZSN1 163 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 RTN4RL1Q86UN2 441 aaPredicted RBP6.06□□□□□ -1.44
SMC4-215ENST00000484799 PHYKPLQ8IUZ5 450 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 GPR135Q8IZ08 494 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 ANKRD53Q8N9V6 530 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 WDR92Q96MX6 357 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 PARPBPQ9NWS1 579 aa6.06□□□□□ -1.44
SMC4-215ENST00000484799 REXO2Q9Y3B8 237 aaKnown RBP6.06□□□□□ -1.44
SMC4-215ENST00000484799 CTDP1Q9Y5B0 961 aaPredicted RBP6.06□□□□□ -1.44
SMC4-215ENST00000484799 TRAF5O00463 557 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 RFPL3O75679 317 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 PRLP01236 227 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 ACRV1P26436 265 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 ACVRL1P37023 503 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 MECP2P51608 486 aaKnown RBP6.05□□□□□ -1.44
SMC4-215ENST00000484799 TGFB2P61812 414 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 EPHA7Q15375 998 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 MAN2A1Q16706 1144 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 CNNM4Q6P4Q7 775 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 PLA2G15Q8NCC3 412 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 CFHR4Q92496 578 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 APPBP2Q92624 585 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 TCF25Q9BQ70 676 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 EPC1Q9H2F5 836 aa6.05□□□□□ -1.44
SMC4-215ENST00000484799 CBX4O00257 560 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 MAFO75444 373 aaPredicted RBP6.04□□□□□ -1.44
SMC4-215ENST00000484799 ZNF202O95125 648 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 SDSP20132 328 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 HGFACQ04756 655 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 TCIRG1Q13488 830 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 GAREM2Q75VX8 874 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 OR5AN1Q8NGI8 311 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 INTS7Q9NVH2 962 aaKnown RBP6.04□□□□□ -1.44
SMC4-215ENST00000484799 TMEM260Q9NX78 707 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 KCNG1Q9UIX4 513 aa6.04□□□□□ -1.44
SMC4-215ENST00000484799 ST20-MTHFSA0A0A6YYL1 179 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 UBE2QL1A1L167 161 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 DVL2O14641 736 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 MFAP3LO75121 409 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 CD40P25942 277 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 PTX3P26022 381 aaPredicted RBP6.03□□□□□ -1.44
SMC4-215ENST00000484799 STAT3P40763 770 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 SCNN1BP51168 640 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 ADCY7P51828 1080 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 FHL2Q14192 279 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 ACAP1Q15027 740 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 C21orf62-AS1Q17RA5 79 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 MIIPQ5JXC2 388 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 FAM111BQ6SJ93 734 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 BMP8AQ7Z5Y6 402 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 AHI1Q8N157 1196 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 ZNF503Q96F45 646 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 UIMC1Q96RL1 719 aa6.03□□□□□ -1.44
SMC4-215ENST00000484799 ELF4Q99607 663 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms