RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 VTNP04004 478 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 CTSAP10619 480 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 SRFP11831 508 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 ALDH7A1P49419 539 aaKnown RBP20.55■□□□□ 0.88
DDR1-245ENST00000484556 PDE1AP54750 535 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 MFAP1P55081 439 aaKnown RBP20.55■□□□□ 0.88
DDR1-245ENST00000484556 FAM43BQ6ZT52 329 aaPredicted RBP20.55■□□□□ 0.88
DDR1-245ENST00000484556 PLPPR4Q7Z2D5 763 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 SENP2Q9HC62 589 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 ARHGEF3Q9NR81 526 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 ATRXP46100 2492 aa20.55■□□□□ 0.88
DDR1-245ENST00000484556 CRYBB1P53674 252 aaPredicted RBP20.54■□□□□ 0.88
DDR1-245ENST00000484556 LMNB2Q03252 620 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 PHLDB3Q6NSJ2 640 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 SLC44A3Q8N4M1 653 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 BCL7CQ8WUZ0 217 aaPredicted RBP20.54■□□□□ 0.88
DDR1-245ENST00000484556 RTKNQ9BST9 563 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 JADE2Q9NQC1 790 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 USP18Q9UMW8 372 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 IRAK3Q9Y616 596 aa20.54■□□□□ 0.88
DDR1-245ENST00000484556 PRR5-ARHGAP8B1AHC4 643 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 ZC3H11AO75152 810 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDR1-245ENST00000484556 ARHGAP8P85298 464 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 NONOQ15233 471 aaKnown RBP eCLIP20.53■□□□□ 0.88
DDR1-245ENST00000484556 IMMTQ16891 758 aaKnown RBP20.53■□□□□ 0.88
DDR1-245ENST00000484556 ST13P5Q8NFI4 369 aaPredicted RBP20.53■□□□□ 0.88
DDR1-245ENST00000484556 PJA1Q8NG27 643 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 RILPL2Q969X0 211 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 CNNM2Q9H8M5 875 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 PCDHB15Q9Y5E8 787 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 DOCK8Q8NF50 2099 aa20.53■□□□□ 0.88
DDR1-245ENST00000484556 GPR32O75388 356 aa20.52■□□□□ 0.88
DDR1-245ENST00000484556 GIT2Q14161 759 aa20.52■□□□□ 0.88
DDR1-245ENST00000484556 PTPN14Q15678 1187 aa20.52■□□□□ 0.88
DDR1-245ENST00000484556 UBE2SQ16763 222 aa20.52■□□□□ 0.88
DDR1-245ENST00000484556 GPR161Q8N6U8 529 aaKnown RBP20.52■□□□□ 0.88
DDR1-245ENST00000484556 MYADMQ96S97 322 aa20.52■□□□□ 0.88
DDR1-245ENST00000484556 SMG5Q9UPR3 1016 aaKnown RBP20.52■□□□□ 0.88
DDR1-245ENST00000484556 SPTLC1O15269 473 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 ZSCAN20P17040 1043 aaPredicted RBP20.51■□□□□ 0.87
DDR1-245ENST00000484556 CLCN4P51793 760 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 DCLRE1AQ6PJP8 1040 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 PPFIBP1Q86W92 1011 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 SDF4Q9BRK5 362 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 VN1R3Q9BXE9 311 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 MRPL9Q9BYD2 267 aaKnown RBP20.51■□□□□ 0.87
DDR1-245ENST00000484556 KCNH7Q9NS40 1196 aa20.51■□□□□ 0.87
DDR1-245ENST00000484556 ZBTB42B2RXF5 422 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 HBP1O60381 514 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 SSBP05455 408 aaKnown RBP eCLIP20.5■□□□□ 0.87
DDR1-245ENST00000484556 MYBP10242 640 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 SDSP20132 328 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 KLRC2P26717 231 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 POLGP54098 1239 aaPredicted RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 WTAPQ15007 396 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 PPM1JQ5JR12 505 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 ANKRD45Q5TZF3 282 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 CWC27Q6UX04 472 aaKnown RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 C15orf39Q6ZRI6 1047 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 DDX53Q86TM3 631 aaKnown RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 ZNF598Q86UK7 904 aaKnown RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 METTL13Q8N6R0 699 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 IGSF21Q96ID5 467 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 ZNF668Q96K58 619 aaPredicted RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 KLHL5Q96PQ7 755 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 SPATA6Q9NWH7 488 aaPredicted RBP20.5■□□□□ 0.87
DDR1-245ENST00000484556 RCAN3Q9UKA8 241 aa20.5■□□□□ 0.87
DDR1-245ENST00000484556 COL1A2P08123 1366 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 BACH1O14867 736 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 C22orf31O95567 290 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 TROAPQ12815 778 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 ITGB3BPQ13352 177 aaPredicted RBP20.49■□□□□ 0.87
DDR1-245ENST00000484556 COL9A3Q14050 684 aaPredicted RBP20.49■□□□□ 0.87
DDR1-245ENST00000484556 SECISBP2LQ93073 1101 aaKnown RBP20.49■□□□□ 0.87
DDR1-245ENST00000484556 PARD6AQ9NPB6 346 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 EPS15L1Q9UBC2 864 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 ZBTB47Q9UFB7 747 aaPredicted RBP20.49■□□□□ 0.87
DDR1-245ENST00000484556 CLUHO75153 1309 aa20.49■□□□□ 0.87
DDR1-245ENST00000484556 DDX39AO00148 427 aaKnown RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 MAFGO15525 162 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 LAMTOR5O43504 91 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 CNPP09543 421 aaKnown RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 TGM1P22735 817 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 SLC26A2P50443 739 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 CSTF1Q05048 431 aaKnown RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 ZNF528Q3MIS6 628 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 TICAM2Q86XR7 235 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 CCDC60Q8IWA6 550 aaPredicted RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 ATRIPQ8WXE1 791 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 RRP36Q96EU6 259 aaKnown RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 WDR6Q9NNW5 1121 aaKnown RBP20.48■□□□□ 0.87
DDR1-245ENST00000484556 MAN1C1Q9NR34 630 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 MYH15Q9Y2K3 1946 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 NFASCO94856 1347 aa20.48■□□□□ 0.87
DDR1-245ENST00000484556 SPDYE3A6NKU9 549 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 IFIT3O14879 490 aaKnown RBP20.47■□□□□ 0.87
DDR1-245ENST00000484556 CCNE2O96020 404 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 FGFR4P22455 802 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 CLCN3P51790 818 aa20.47■□□□□ 0.87
DDR1-245ENST00000484556 NLRP11P59045 1033 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms