RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.7■■■□□ 2.35
SMDT1-203ENST00000484235 TCP11Q8WWU5 503 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 PCDHA11Q9Y5I1 949 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 CLIC4Q9Y696 253 aa29.7■■■□□ 2.35
SMDT1-203ENST00000484235 PP2D1A8MPX8 630 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 GPR182O15218 404 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 EIF4BP23588 611 aaKnown RBP29.69■■■□□ 2.34
SMDT1-203ENST00000484235 DNAJB2P25686 324 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 PBX2P40425 430 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 ECM1Q16610 540 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 RHPN2Q8IUC4 686 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 PRPF31Q8WWY3 499 aaKnown RBP29.69■■■□□ 2.34
SMDT1-203ENST00000484235 NLRP7Q8WX94 980 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 TMEM143Q96AN5 459 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 AK8Q96MA6 479 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 SCLT1Q96NL6 688 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 ST3GAL5Q9UNP4 418 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 KIAA1024Q9UPX6 916 aa29.69■■■□□ 2.34
SMDT1-203ENST00000484235 LOC101059915A0A1B0GWI6 518 aaPredicted RBP29.68■■■□□ 2.34
SMDT1-203ENST00000484235 ENPP3O14638 875 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 CDC25AP30304 524 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 RABGGTBP53611 331 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 NFX1Q12986 1120 aaKnown RBP29.68■■■□□ 2.34
SMDT1-203ENST00000484235 GRIN2CQ14957 1233 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 ZNF410Q86VK4 478 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 PSPC1Q8WXF1 523 aaKnown RBP29.68■■■□□ 2.34
SMDT1-203ENST00000484235 TIFAQ96CG3 184 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 MTRQ99707 1265 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 ERVK-5Q9HDB9 667 aa29.68■■■□□ 2.34
SMDT1-203ENST00000484235 ZSCAN22P10073 491 aaPredicted RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 DARSP14868 501 aaKnown RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 PTPAQ15257 358 aa29.67■■■□□ 2.34
SMDT1-203ENST00000484235 ZNF668Q96K58 619 aaPredicted RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 ZBED2Q9BTP6 218 aa29.67■■■□□ 2.34
SMDT1-203ENST00000484235 MMTAG2Q9BU76 263 aaKnown RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 GCOM2Q9BZD3 368 aaPredicted RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 ATP6V0A4Q9HBG4 840 aa29.67■■■□□ 2.34
SMDT1-203ENST00000484235 BMP2KQ9NSY1 1161 aaPredicted RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 DDX19AQ9NUU7 478 aaKnown RBP29.67■■■□□ 2.34
SMDT1-203ENST00000484235 COL4A3BPQ9Y5P4 624 aa29.67■■■□□ 2.34
SMDT1-203ENST00000484235 ASAP2O43150 1006 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 FOSL2P15408 326 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 FAM228AQ86W67 206 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 MYOCDQ8IZQ8 938 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 TOP1MTQ969P6 601 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 TMX1Q9H3N1 280 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 XPNPEP1Q9NQW7 623 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 DNM3Q9UQ16 869 aa29.66■■■□□ 2.34
SMDT1-203ENST00000484235 GJB5O95377 273 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 LONP1P36776 959 aaKnown RBP29.65■■■□□ 2.34
SMDT1-203ENST00000484235 LAMTOR4Q0VGL1 99 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 KSR1Q8IVT5 923 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 KCTD17Q8N5Z5 321 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 YBX2Q9Y2T7 364 aaKnown RBP29.65■■■□□ 2.34
SMDT1-203ENST00000484235 SIP14410 1827 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 TTC28Q96AY4 2481 aa29.65■■■□□ 2.34
SMDT1-203ENST00000484235 A0A087WZ62 844 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 ARHGEF35A5YM69 484 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 TLL1O43897 1013 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 CEBPZQ03701 1054 aaKnown RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 MXD4Q14582 209 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 PADI6Q6TGC4 694 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 TMCO2Q7Z6W1 182 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 RTN4RL1Q86UN2 441 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 NLRP4Q96MN2 994 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 USP28Q96RU2 1077 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 RAD9AQ99638 391 aa29.64■■■□□ 2.34
SMDT1-203ENST00000484235 FDXACB1Q9BRP7 624 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 INO80BQ9C086 356 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 TSPYL2Q9H2G4 693 aaPredicted RBP29.64■■■□□ 2.34
SMDT1-203ENST00000484235 SPTBN5Q9NRC6 3674 aaKnown RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 SLC26A4O43511 780 aa29.63■■■□□ 2.33
SMDT1-203ENST00000484235 USO1O60763 962 aaKnown RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 ARL2P36404 184 aa29.63■■■□□ 2.33
SMDT1-203ENST00000484235 HYIQ5T013 277 aa29.63■■■□□ 2.33
SMDT1-203ENST00000484235 FOXD4L5Q5VV16 416 aaPredicted RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 MCPH1Q8NEM0 835 aa29.63■■■□□ 2.33
SMDT1-203ENST00000484235 FOXD4L4Q8WXT5 416 aaPredicted RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 ZNF396Q96N95 335 aaPredicted RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 MORC2Q9Y6X9 1032 aaPredicted RBP29.63■■■□□ 2.33
SMDT1-203ENST00000484235 F13A1P00488 732 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 SRGAP2CP0DJJ0 459 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 MYOGP15173 224 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 UBA7P41226 1012 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 SLC39A14Q15043 492 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 NT5C3AQ9H0P0 336 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 BHMT2Q9H2M3 363 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 ZNF576Q9H609 170 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 SLC28A3Q9HAS3 691 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 IFT122Q9HBG6 1241 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 SRPRBQ9Y5M8 271 aaKnown RBP29.62■■■□□ 2.33
SMDT1-203ENST00000484235 CHD9Q3L8U1 2897 aa29.62■■■□□ 2.33
SMDT1-203ENST00000484235 EYA4O95677 639 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 CYP11B2P19099 503 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 MARCKSP29966 332 aaPredicted RBP29.61■■■□□ 2.33
SMDT1-203ENST00000484235 PKP1Q13835 747 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 ZRSR1Q15695 479 aaKnown RBP29.61■■■□□ 2.33
SMDT1-203ENST00000484235 FAM117BQ6P1L5 589 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 CABP7Q86V35 215 aa29.61■■■□□ 2.33
SMDT1-203ENST00000484235 LINC01599Q8WXQ3 324 aa29.61■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms