RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 CLRN3Q8NCR9 226 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 BRF1Q92994 677 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 CDK5RAP3Q96JB5 506 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 CCDC138Q96M89 665 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 TAAR9Q96RI9 348 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 DNM3Q9UQ16 869 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 ASXL2Q76L83 1435 aa5.39□□□□□ -1.55
PTCD3-214ENST00000483925 A0A1W2PQJ5 194 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 DYTNA2CJ06 578 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ARVCFO00192 962 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 TPP1O14773 563 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 FFAR3O14843 346 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 GSTA4O15217 222 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 GSTM1P09488 218 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ATP2A2P16615 1042 aaKnown RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ECI1P42126 302 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 TM4SF4P48230 202 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 KCNC1P48547 511 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 KRTAP10-2P60368 255 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 FAM193AP78312 1265 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ZNF200P98182 395 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 PLP2Q04941 152 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 IFIT5Q13325 482 aaKnown RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 PDE1CQ14123 709 aaPredicted RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 CLUL1Q15846 466 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ARHGAP44Q17R89 818 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 DACT2Q5SW24 774 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 GGNQ86UU5 652 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 CLASRPQ8N2M8 674 aaKnown RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 DIO2Q92813 273 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 C1orf159Q96HA4 380 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 SLC12A9Q9BXP2 914 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 CELF4Q9BZC1 486 aaKnown RBP5.38□□□□□ -1.55
PTCD3-214ENST00000483925 ARFGAP3Q9NP61 516 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 LRCH1Q9Y2L9 728 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHA8Q9Y5H6 950 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 FHOD1Q9Y613 1164 aa5.38□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA12O60330 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PQBP1O60828 265 aaKnown RBP5.37□□□□□ -1.55
PTCD3-214ENST00000483925 CYBBP04839 570 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 MSL3P1P0C860 447 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 SLC5A1P13866 664 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 ECE1P42892 770 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 NOP2P46087 812 aaKnown RBP5.37□□□□□ -1.55
PTCD3-214ENST00000483925 LIMS1P48059 325 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 SLURP1P55000 103 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 GPR85P60893 370 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 HTRA3P83110 453 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 AMPD2Q01433 879 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 ACAP2Q15057 778 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 SPATS1Q496A3 300 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 FAM47CQ5HY64 1035 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 ATAT1Q5SQI0 421 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PPP4R3AQ6IN85 833 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 LVRNQ6Q4G3 990 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PAQR3Q6TCH7 311 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 RASSF3Q86WH2 238 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 MIER2Q8N344 545 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 EFHBQ8N7U6 833 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 DEPTORQ8TB45 409 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.37□□□□□ -1.55
PTCD3-214ENST00000483925 SSH1Q8WYL5 1049 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 SGCZQ96LD1 299 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 ALG1Q9BT22 464 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 ISCA1Q9BUE6 129 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 POLG2Q9UHN1 485 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA9Q9Y5G4 932 aaKnown RBP5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA8Q9Y5G5 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA7Q9Y5G6 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA6Q9Y5G7 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA3Q9Y5H0 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PCDHGA2Q9Y5H1 932 aa5.37□□□□□ -1.55
PTCD3-214ENST00000483925 PTPDC1A2A3K4 754 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 GOLGA8AA7E2F4 631 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 GOLGA8BA8MQT2 603 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SHOXO15266 292 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SRGAP3O43295 1099 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 TLR5O60602 858 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SOD2P04179 222 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 DBHP09172 617 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 GRK2P25098 689 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 GRK6P43250 576 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SCAND1P57086 179 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 ZNF445P59923 1031 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 PAK1Q13153 545 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 TRIM14Q14142 442 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 BROXQ5VW32 411 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 BICRALQ6AI39 1079 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 KCNT2Q6UVM3 1135 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 CYP2R1Q6VVX0 501 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 LDHAL6AQ6ZMR3 332 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 CCDC149Q6ZUS6 474 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 MAATS1Q7Z4T9 603 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 SKAP1Q86WV1 359 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 TEKT5Q96M29 485 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 BDH2Q9BUT1 245 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 PHF20Q9BVI0 1012 aa5.36□□□□□ -1.55
PTCD3-214ENST00000483925 NOL6Q9H6R4 1146 aaKnown RBP5.36□□□□□ -1.55
PTCD3-214ENST00000483925 PDLIM7Q9NR12 457 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms