RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 ARL6IP4Q66PJ3 421 aaKnown RBP20.09■□□□□ 0.81
HDAC6-225ENST00000483506 RTN4RL1Q86UN2 441 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-225ENST00000483506 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-225ENST00000483506 FAM161BQ96MY7 647 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 LRWD1Q9UFC0 647 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 ST3GAL5Q9UNP4 418 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 TRANK1O15050 2925 aa20.09■□□□□ 0.81
HDAC6-225ENST00000483506 DGAT1O75907 488 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 TAP1Q03518 808 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 GRIN2CQ14957 1233 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 DTHD1Q6ZMT9 781 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 TCP11Q8WWU5 503 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 NACC1Q96RE7 527 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 CDX2Q99626 313 aaPredicted RBP20.08■□□□□ 0.81
HDAC6-225ENST00000483506 ZBED2Q9BTP6 218 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 RC3H2Q9HBD1 1191 aaKnown RBP20.08■□□□□ 0.81
HDAC6-225ENST00000483506 XPNPEP1Q9NQW7 623 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 MTMR6Q9Y217 621 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 STXBP5LQ9Y2K9 1186 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 INSL6Q9Y581 213 aa20.08■□□□□ 0.81
HDAC6-225ENST00000483506 LCHNA4D1U4 455 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 ARHGEF15O94989 841 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 BMP15O95972 392 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 NFX1Q12986 1120 aaKnown RBP20.07■□□□□ 0.8
HDAC6-225ENST00000483506 RESTQ13127 1097 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 DSC3Q14574 896 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 FERMT3Q86UX7 667 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 PIGOQ8TEQ8 1089 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 NLRP7Q8WX94 980 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 PSPC1Q8WXF1 523 aaKnown RBP20.07■□□□□ 0.8
HDAC6-225ENST00000483506 MTRQ99707 1265 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 COL4A3BPQ9Y5P4 624 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 COL6A3P12111 3177 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 MYO9BQ13459 2157 aa20.07■□□□□ 0.8
HDAC6-225ENST00000483506 STX6O43752 255 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 MGEA5O60502 916 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 ECM1Q16610 540 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 RHPN2Q8IUC4 686 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 PRPF31Q8WWY3 499 aaKnown RBP20.06■□□□□ 0.8
HDAC6-225ENST00000483506 TMEM143Q96AN5 459 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 GCOM2Q9BZD3 368 aaPredicted RBP20.06■□□□□ 0.8
HDAC6-225ENST00000483506 ATP6V0A4Q9HBG4 840 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 RGS18Q9NS28 235 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 C1orf112Q9NSG2 853 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 FOXD4L1Q9NU39 408 aa20.06■□□□□ 0.8
HDAC6-225ENST00000483506 A0A087WZ62 844 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 LINC01553A4QN01 128 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 ASAP2O43150 1006 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 PDIA4P13667 645 aaKnown RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 CCT6AP40227 531 aaKnown RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 FAM117BQ6P1L5 589 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 NPAS4Q8IUM7 802 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 ZNF668Q96K58 619 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 SCLT1Q96NL6 688 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 FDXACB1Q9BRP7 624 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 MMTAG2Q9BU76 263 aaKnown RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 INO80BQ9C086 356 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-225ENST00000483506 IFT122Q9HBG6 1241 aa20.05■□□□□ 0.8
HDAC6-225ENST00000483506 C9IYK1 514 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 ARL2P36404 184 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 SARSP49591 514 aaKnown RBP20.04■□□□□ 0.8
HDAC6-225ENST00000483506 FAM189BP81408 668 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 LAMTOR4Q0VGL1 99 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 MXD4Q14582 209 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-225ENST00000483506 HYIQ5T013 277 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 KSR1Q8IVT5 923 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 KCTD17Q8N5Z5 321 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 SNX29Q8TEQ0 813 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 ZNF689Q96CS4 500 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-225ENST00000483506 CCDC43Q96MW1 224 aaKnown RBP20.04■□□□□ 0.8
HDAC6-225ENST00000483506 ADAM2Q99965 735 aa20.04■□□□□ 0.8
HDAC6-225ENST00000483506 ZSCAN16Q9H4T2 348 aaPredicted RBP20.04■□□□□ 0.8
HDAC6-225ENST00000483506 A0A087WWV3 80 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 PP2D1A8MPX8 630 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 UPP2O95045 317 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 ERVK-21P61565 698 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 POU5F1BQ06416 359 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 SF3A1Q15459 793 aaKnown RBP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 KRT79Q5XKE5 535 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 SLC24A5Q71RS6 500 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 IFNLR1Q8IU57 520 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 MYLIPQ8WY64 445 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 AK8Q96MA6 479 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 NLRP4Q96MN2 994 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 YME1L1Q96TA2 773 aa20.03■□□□□ 0.8
HDAC6-225ENST00000483506 BMP2KQ9NSY1 1161 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 RNF216Q9NWF9 866 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 MORC2Q9Y6X9 1032 aaPredicted RBP20.03■□□□□ 0.8
HDAC6-225ENST00000483506 MYH15Q9Y2K3 1946 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 DENND3A2RUS2 1198 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 VWA3AA6NCI4 1184 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 SLC26A4O43511 780 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 USO1O60763 962 aaKnown RBP20.02■□□□□ 0.8
HDAC6-225ENST00000483506 DGKIO75912 1065 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 STAG3L1P0CL83 205 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 SRGAP1Q7Z6B7 1085 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 MCPH1Q8NEM0 835 aa20.02■□□□□ 0.8
HDAC6-225ENST00000483506 TRAIPQ9BWF2 469 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms