RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 CDH23Q9H251 3354 aa14.94□□□□□ -0.02
SSR1-208ENST00000483409 USO1O60763 962 aaKnown RBP14.93□□□□□ -0.02
SSR1-208ENST00000483409 CSDE1O75534 798 aaKnown RBP14.93□□□□□ -0.02
SSR1-208ENST00000483409 UPP2O95045 317 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 GJB5O95377 273 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 ARL6IP4Q66PJ3 421 aaKnown RBP14.93□□□□□ -0.02
SSR1-208ENST00000483409 EXOC8Q8IYI6 725 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 LINC01599Q8WXQ3 324 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 NLRP4Q96MN2 994 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 NACC1Q96RE7 527 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 TMX1Q9H3N1 280 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 ATP6V0A4Q9HBG4 840 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 XPNPEP1Q9NQW7 623 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 ST3GAL5Q9UNP4 418 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 CLIC4Q9Y696 253 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 NLRC5Q86WI3 1866 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 MYH11P35749 1972 aa14.93□□□□□ -0.02
SSR1-208ENST00000483409 TMEM265A0A087WTH1 108 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 A0A087WZ62 844 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 LCHNA4D1U4 455 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 ENPP3O14638 875 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 GPR182O15218 404 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 GAS2O43903 313 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 DGAT1O75907 488 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 BMP15O95972 392 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 CA3P07451 260 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 XRCC6P12956 609 aaKnown RBP eCLIP14.92□□□□□ -0.02
SSR1-208ENST00000483409 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 IBSPP21815 317 aaPredicted RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 FGFR4P22455 802 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 CEBPZQ03701 1054 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 ZRSR1Q15695 479 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 KRT79Q5XKE5 535 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 ZNF710Q8N1W2 664 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 TCP11Q8WWU5 503 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 PRPF31Q8WWY3 499 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 PSPC1Q8WXF1 523 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 FDXACB1Q9BRP7 624 aaPredicted RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 MMTAG2Q9BU76 263 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 FTHL17Q9BXU8 183 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 SEMA6BQ9H3T3 888 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 ZSCAN16Q9H4T2 348 aaPredicted RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 ZNF576Q9H609 170 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 DDX19AQ9NUU7 478 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 DBR1Q9UK59 544 aaKnown RBP14.92□□□□□ -0.02
SSR1-208ENST00000483409 KIAA1024Q9UPX6 916 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 COL4A3BPQ9Y5P4 624 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 STK24Q9Y6E0 443 aa14.92□□□□□ -0.02
SSR1-208ENST00000483409 ARHGEF35A5YM69 484 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 MGEA5O60502 916 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 ARHGEF15O94989 841 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 MUTP22033 750 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 EIF4BP23588 611 aaKnown RBP14.91□□□□□ -0.02
SSR1-208ENST00000483409 LAMTOR4Q0VGL1 99 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 ODR4Q5SWX8 454 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 PPP2R2DQ66LE6 453 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 MAEAQ7L5Y9 396 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 RTN4RL1Q86UN2 441 aaPredicted RBP14.91□□□□□ -0.02
SSR1-208ENST00000483409 ZNF410Q86VK4 478 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 TOP1MTQ969P6 601 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 GCOM2Q9BZD3 368 aaPredicted RBP14.91□□□□□ -0.02
SSR1-208ENST00000483409 TSPYL2Q9H2G4 693 aaPredicted RBP14.91□□□□□ -0.02
SSR1-208ENST00000483409 SLC28A3Q9HAS3 691 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 MTMR10Q9NXD2 777 aa14.91□□□□□ -0.02
SSR1-208ENST00000483409 CHD9Q3L8U1 2897 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 DENND3A2RUS2 1198 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 SRGAP2CP0DJJ0 459 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 CDC42EP1Q00587 391 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 GRIN1Q05586 938 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 PKP1Q13835 747 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 PTPAQ15257 358 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 PADI6Q6TGC4 694 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 GUCD1Q96NT3 240 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 USP28Q96RU2 1077 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 RAD9AQ99638 391 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 ADAM2Q99965 735 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 POLR3FQ9H1D9 316 aaPredicted RBP14.9□□□□□ -0.02
SSR1-208ENST00000483409 BHMT2Q9H2M3 363 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 GPRC5CQ9NQ84 441 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 FNDC1Q4ZHG4 1894 aaPredicted RBP14.9□□□□□ -0.02
SSR1-208ENST00000483409 CHD7Q9P2D1 2997 aa14.9□□□□□ -0.02
SSR1-208ENST00000483409 KIAA1671Q9BY89 1806 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 E9PMD0 336 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 ZSCAN22P10073 491 aaPredicted RBP14.89□□□□□ -0.03
SSR1-208ENST00000483409 MARCKSP29966 332 aaPredicted RBP14.89□□□□□ -0.03
SSR1-208ENST00000483409 GRIN2CQ14957 1233 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 FOXD4L6Q3SYB3 417 aaPredicted RBP14.89□□□□□ -0.03
SSR1-208ENST00000483409 FOXD4L3Q6VB84 417 aaPredicted RBP14.89□□□□□ -0.03
SSR1-208ENST00000483409 SPRED2Q7Z698 418 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 RNF149Q8NC42 400 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 ASAP3Q8TDY4 903 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 YME1L1Q96TA2 773 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 PLIN2Q99541 437 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 IFT122Q9HBG6 1241 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 COL4A4P53420 1690 aaPredicted RBP14.89□□□□□ -0.03
SSR1-208ENST00000483409 RALGAPA2Q2PPJ7 1873 aa14.89□□□□□ -0.03
SSR1-208ENST00000483409 TCHHQ07283 1943 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 COL4A6Q14031 1691 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 F13A1P00488 732 aa14.88□□□□□ -0.03
SSR1-208ENST00000483409 SFPQP23246 707 aaKnown RBP eCLIP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms