RNA–Protein interactions for RNA: ENST00000483086.1

HDLBP-239, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 620 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-239ENST00000483086 FAM189BP81408 668 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 CYP4A11Q02928 519 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 SKIV2LQ15477 1246 aaKnown RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 MRPL38Q96DV4 380 aaKnown RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 LXNQ9BS40 222 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 ALG13Q9NP73 1137 aaKnown RBP13.56□□□□□ -0.24
HDLBP-239ENST00000483086 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
HDLBP-239ENST00000483086 SLITRK3O94933 977 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 CSPG5O95196 566 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 EIF4BP23588 611 aaKnown RBP13.55□□□□□ -0.24
HDLBP-239ENST00000483086 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
HDLBP-239ENST00000483086 MRPS5P82675 430 aaKnown RBP13.55□□□□□ -0.24
HDLBP-239ENST00000483086 NBR1Q14596 966 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 EPHA7Q15375 998 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 LRRC55Q6ZSA7 311 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 CMTR2Q8IYT2 770 aaKnown RBP13.55□□□□□ -0.24
HDLBP-239ENST00000483086 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 XPNPEP1Q9NQW7 623 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 CYP26B1Q9NR63 512 aa13.55□□□□□ -0.24
HDLBP-239ENST00000483086 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-239ENST00000483086 POTEMA6NI47 508 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 GPR182O15218 404 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 ITGB1P05556 798 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 P4HBP07237 508 aaKnown RBP13.54□□□□□ -0.24
HDLBP-239ENST00000483086 ATP2B1P20020 1258 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 IRS1P35568 1242 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 CALCRLQ16602 461 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 SLC24A5Q71RS6 500 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 C4orf19Q8IY42 314 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 ADAMTS19Q8TE59 1207 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 TMEM143Q96AN5 459 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 MAP7D2Q96T17 732 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 HSD17B14Q9BPX1 270 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 EIF2AK1Q9BQI3 630 aaKnown RBP13.54□□□□□ -0.24
HDLBP-239ENST00000483086 DHX33Q9H6R0 707 aaKnown RBP13.54□□□□□ -0.24
HDLBP-239ENST00000483086 CWH43Q9H720 699 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 MINDY3Q9H8M7 445 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 IFT122Q9HBG6 1241 aa13.54□□□□□ -0.24
HDLBP-239ENST00000483086 SUCLA2Q9P2R7 463 aaPredicted RBP13.54□□□□□ -0.24
HDLBP-239ENST00000483086 DENND3A2RUS2 1198 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 MEIS3P2A8K0S8 358 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 SPATA31C1P0DKV0 1188 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 TMOD1P28289 359 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 YWHABP31946 246 aaKnown RBP13.53□□□□□ -0.24
HDLBP-239ENST00000483086 TXKP42681 527 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 COL19A1Q14993 1142 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 CLLU1OSQ5K130 101 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 ZNF598Q86UK7 904 aaKnown RBP13.53□□□□□ -0.24
HDLBP-239ENST00000483086 ECHDC2Q86YB7 292 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 RHPN2Q8IUC4 686 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 KLHL23Q8NBE8 558 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 FBXO18Q8NFZ0 1043 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 SPPL3Q8TCT6 385 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 NLRP7Q8WX94 980 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 HLA-CQ95604 372 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 C8orf76Q96K31 380 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 CEP170P1Q96L14 293 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 LLPHQ9BRT6 129 aaKnown RBP13.53□□□□□ -0.24
HDLBP-239ENST00000483086 UBE2ZQ9H832 354 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-239ENST00000483086 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
HDLBP-239ENST00000483086 PLAGL2Q9UPG8 496 aa13.53□□□□□ -0.24
HDLBP-239ENST00000483086 TBKBP1A7MCY6 615 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 NEMFO60524 1076 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 RB1P06400 928 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 STAG3L1P0CL83 205 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 MCM7P33993 719 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 LTBRP36941 435 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 PBX3P40426 434 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 TOB1P50616 345 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 DLX2Q07687 328 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 ZNF174Q15697 407 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 ADGRD2Q7Z7M1 963 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 SLFN12Q8IYM2 578 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 KHSRPQ92945 711 aaKnown RBP eCLIP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 ZSCAN31Q96LW9 406 aaPredicted RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 TYW1Q9NV66 732 aaKnown RBP13.52□□□□□ -0.25
HDLBP-239ENST00000483086 TMEM161AQ9NX61 479 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 PCDHA12Q9UN75 941 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 PCDHB7Q9Y5E2 793 aa13.52□□□□□ -0.25
HDLBP-239ENST00000483086 LINC01565O15544 149 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 B4GALT3O60512 393 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 EIF5BO60841 1220 aaKnown RBP13.51□□□□□ -0.25
HDLBP-239ENST00000483086 MED24O75448 989 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 HYAL1Q12794 435 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 TRIM29Q14134 588 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 EMC2Q15006 297 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 ECM1Q16610 540 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 LONRF3Q496Y0 759 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 TPH2Q8IWU9 490 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 PIGOQ8TEQ8 1089 aa13.51□□□□□ -0.25
HDLBP-239ENST00000483086 PRPF31Q8WWY3 499 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms