RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 EFCAB12Q6NXP0 572 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 FBXO46Q6PJ61 603 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-205ENST00000482968 FAM178BQ8IXR5 827 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 EXOC8Q8IYI6 725 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 LRRC71Q8N4P6 559 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 METTL13Q8N6R0 699 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 PCSK9Q8NBP7 692 aaKnown RBP16.62■□□□□ 0.25
PHGDH-205ENST00000482968 GTPBP4Q9BZE4 634 aaKnown RBP16.62■□□□□ 0.25
PHGDH-205ENST00000482968 RNF208Q9H0X6 261 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 POLR3FQ9H1D9 316 aaPredicted RBP16.62■□□□□ 0.25
PHGDH-205ENST00000482968 BRCA2P51587 3418 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 EVPLQ92817 2033 aa16.62■□□□□ 0.25
PHGDH-205ENST00000482968 CCL5P13501 91 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 NMT1P30419 496 aaKnown RBP16.61■□□□□ 0.25
PHGDH-205ENST00000482968 DRP2Q13474 957 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 ADSSL1Q8N142 457 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 CBX8Q9HC52 389 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 OLFML3Q9NRN5 406 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 SEL1LQ9UBV2 794 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 COL1A2P08123 1366 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 NRCAMQ92823 1304 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 IGKV6-21A0A0C4DH24 114 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 RRN3P2A6NIE6 340 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 GCNT3O95395 438 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 C22orf31O95567 290 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 CAVIN2O95810 425 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 CASP5P51878 434 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 MKRN4PQ13434 485 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-205ENST00000482968 STIM1Q13586 685 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 MARCH8Q5T0T0 291 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 MTHFD1LQ6UB35 978 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 C7orf31Q8N865 590 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 RETREG2Q8NC44 543 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 FAM200AQ8TCP9 573 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 BSNDQ8WZ55 320 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 DEFB118Q96PH6 123 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 JPH2Q9BR39 696 aaPredicted RBP16.61■□□□□ 0.25
PHGDH-205ENST00000482968 HDAC6Q9UBN7 1215 aa16.61■□□□□ 0.25
PHGDH-205ENST00000482968 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 MAGEB2O15479 319 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 MYBP10242 640 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 ARL2P36404 184 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 STX17P56962 302 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 DMP1Q13316 513 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-205ENST00000482968 PKN2Q16513 984 aaKnown RBP16.6■□□□□ 0.25
PHGDH-205ENST00000482968 NBPF20Q3BBV1 942 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 IER5Q5VY09 327 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 ZNF720Q7Z2F6 126 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 LUZP1Q86V48 1076 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 ARRDC4Q8NCT1 418 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 LMBR1Q8WVP7 490 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 IFT74Q96LB3 600 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 FIZ1Q96SL8 496 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 C17orf75Q9HAS0 396 aa16.6■□□□□ 0.25
PHGDH-205ENST00000482968 PAK6Q9NQU5 681 aaPredicted RBP16.6■□□□□ 0.25
PHGDH-205ENST00000482968 SLC16A4O15374 487 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 GAS2O43903 313 aaKnown RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 NPTX2P47972 431 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 DNM2P50570 870 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 CLCN3P51790 818 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 ACLYP53396 1101 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 HIC1Q14526 733 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 ZC2HC1CQ53FD0 456 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 MYOCDQ8IZQ8 938 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 SCFD1Q8WVM8 642 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 TCP11Q8WWU5 503 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 PRPF31Q8WWY3 499 aaKnown RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 SUCLA2Q9P2R7 463 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 CTNND2Q9UQB3 1225 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 PRPF6O94906 941 aaKnown RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 GLRA2P23416 452 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 ERCC5P28715 1186 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 SMTNP53814 917 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 RTP1P59025 263 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 ZNF200P98182 395 aaPredicted RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 IQCB1Q15051 598 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 COBLL1Q53SF7 1204 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 NFRKBQ6P4R8 1299 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 KSR1Q8IVT5 923 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 NELFCDQ8IXH7 590 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 GUF1Q8N442 669 aaKnown RBP16.59■□□□□ 0.25
PHGDH-205ENST00000482968 AOPEPQ8N6M6 819 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 ASAP3Q8TDY4 903 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 NELFBQ8WX92 580 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 MED15Q96RN5 788 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 BPIFA3Q9BQP9 254 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 KMT5AQ9NQR1 393 aa16.59■□□□□ 0.25
PHGDH-205ENST00000482968 TRIP12Q14669 1992 aaPredicted RBP16.58■□□□□ 0.25
PHGDH-205ENST00000482968 FRMPD3Q5JV73 1810 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 C17orf102A2RUQ5 167 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 BECN2A8MW95 431 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 K7ENM7 598 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 PSMA7O14818 248 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 GJB1P08034 283 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 TMOD1P28289 359 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 CLCN1P35523 988 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 PAK1Q13153 545 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 FAM47CQ5HY64 1035 aa16.58■□□□□ 0.24
PHGDH-205ENST00000482968 CT47A1Q5JQC4 288 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms