RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 EIF2AK1Q9BQI3 630 aaKnown RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 PDGFDQ9GZP0 370 aaPredicted RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 CNOT8Q9UFF9 292 aaKnown RBP16.59■□□□□ 0.25
DDR1-244ENST00000482873 MCM8Q9UJA3 840 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 SCN9AQ15858 1988 aa16.59■□□□□ 0.25
DDR1-244ENST00000482873 KCNK3O14649 394 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 IRF6O14896 467 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 PPIP5K2O43314 1243 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 MAP2K1Q02750 393 aaPredicted RBP16.58■□□□□ 0.25
DDR1-244ENST00000482873 PTK2Q05397 1052 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 DRP2Q13474 957 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 NEDD9Q14511 834 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 LRIG3Q6UXM1 1119 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 FAM228AQ86W67 206 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 FUKQ8N0W3 1084 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 GIMAP7Q8NHV1 300 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 AKT1S1Q96B36 256 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 SPAG5Q96R06 1193 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 WDR18Q9BV38 432 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 IDI2Q9BXS1 227 aa16.58■□□□□ 0.25
DDR1-244ENST00000482873 ARMCX3Q9UH62 379 aaPredicted RBP16.58■□□□□ 0.25
DDR1-244ENST00000482873 FLT3P36888 993 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 CDR1P51861 262 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 KNOP1Q1ED39 458 aaKnown RBP16.58■□□□□ 0.24
DDR1-244ENST00000482873 CYB5D1Q6P9G0 228 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 DYDC2Q96IM9 177 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 MYO3BQ8WXR4 1341 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 LTBP1Q14766 1721 aa16.58■□□□□ 0.24
DDR1-244ENST00000482873 BRWD3Q6RI45 1802 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 GOLGA6L7A0A1B0GV03 622 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 TMCO5BA8MYB1 307 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 DCDC2CA8MYV0 355 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 RPA1P27694 616 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 DGKZQ13574 1117 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 WLSQ5T9L3 541 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 MYCT1Q8N699 235 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 RNF217Q8TC41 542 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 CRYGNQ8WXF5 182 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 CYP3A7-CYP3A51PA0A087WV96 503 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 CYP3A7P24462 503 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 BYSLQ13895 437 aaKnown RBP16.57■□□□□ 0.24
DDR1-244ENST00000482873 ANKRD20A8PQ5CZ79 823 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 SYT2Q8N9I0 419 aaPredicted RBP16.57■□□□□ 0.24
DDR1-244ENST00000482873 ERMNQ8TAM6 284 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 SYN2Q92777 582 aaPredicted RBP16.57■□□□□ 0.24
DDR1-244ENST00000482873 AP1M1Q9BXS5 423 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 LUC7LQ9NQ29 371 aaKnown RBP16.57■□□□□ 0.24
DDR1-244ENST00000482873 HAUS2Q9NVX0 235 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 RABGAP1Q9Y3P9 1069 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 ARFGEF1Q9Y6D6 1849 aa16.57■□□□□ 0.24
DDR1-244ENST00000482873 ASIC2Q16515 512 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 ZNF571Q7Z3V5 609 aaPredicted RBP16.56■□□□□ 0.24
DDR1-244ENST00000482873 CEP57Q86XR8 500 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 PARP9Q8IXQ6 854 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 RBM46Q8TBY0 533 aaKnown RBP16.56■□□□□ 0.24
DDR1-244ENST00000482873 SEC16BQ96JE7 1060 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 CEP63Q96MT8 703 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 ACTR5Q9H9F9 607 aaPredicted RBP16.56■□□□□ 0.24
DDR1-244ENST00000482873 WRAP73Q9P2S5 460 aaPredicted RBP16.56■□□□□ 0.24
DDR1-244ENST00000482873 VAV3Q9UKW4 847 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 FOCADQ5VW36 1801 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 TBCAO75347 108 aaKnown RBP16.56■□□□□ 0.24
DDR1-244ENST00000482873 ELF1P32519 619 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 SREBF1P36956 1147 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 AP3B2Q13367 1082 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 ODF2Q5BJF6 829 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 SCFD2Q8WU76 684 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 LRRC4CQ9HCJ2 640 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 FBXL5Q9UKA1 691 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 ZBTB21Q9ULJ3 1066 aa16.56■□□□□ 0.24
DDR1-244ENST00000482873 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 XRCC5P13010 732 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 UCHL3P15374 230 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 STAT2P52630 851 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 RPS6KA1Q15418 735 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 SNCBQ16143 134 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 UBLCP1Q8WVY7 318 aaPredicted RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.55■□□□□ 0.24
DDR1-244ENST00000482873 RAPGEF5Q92565 580 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 TACO1Q9BSH4 297 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 TMEM39BQ9GZU3 492 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 DDX47Q9H0S4 455 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 NUCKS1Q9H1E3 243 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 GANQ9H2C0 597 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 ODF2LQ9ULJ1 636 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 NOVA2Q9UNW9 492 aaKnown RBP16.55■□□□□ 0.24
DDR1-244ENST00000482873 CEP104O60308 925 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 ATP2C2O75185 946 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 NR3C1P04150 777 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 PON1P27169 355 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 CYP2J2P51589 502 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 CUL1Q13616 776 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 EXOC3L4Q17RC7 722 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 LRCH2Q5VUJ6 765 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 RINT1Q6NUQ1 792 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 TAF4BQ92750 862 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 LRRC45Q96CN5 670 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 ASTN1O14525 1302 aa16.55■□□□□ 0.24
DDR1-244ENST00000482873 SLITRK3O94933 977 aa16.54■□□□□ 0.24
DDR1-244ENST00000482873 KIF4AO95239 1232 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms