RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 GABBR1Q9UBS5 961 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 LIMD1Q9UGP4 676 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 SORCS3Q9UPU3 1222 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 AKT3Q9Y243 479 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 HCFC2Q9Y5Z7 792 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 CNTNAP5Q8WYK1 1306 aa14.54□□□□□ -0.08
TMEM54-206ENST00000482771 IGLV3-22A0A075B6J6 115 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 NT5C1B-RDH14C9J2C7 533 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 BRD1O95696 1058 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 PSAPP07602 524 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 CYP3A4P08684 503 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 EIF4BP23588 611 aaKnown RBP14.53□□□□□ -0.08
TMEM54-206ENST00000482771 CA8P35219 290 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 ITIH3Q06033 890 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 MTMR3Q13615 1198 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 SMC1AQ14683 1233 aaKnown RBP14.53□□□□□ -0.08
TMEM54-206ENST00000482771 RTN1Q16799 776 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 APOA5Q6Q788 366 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 LRRC43Q8N309 656 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 C12orf76Q8N812 135 aaPredicted RBP14.53□□□□□ -0.08
TMEM54-206ENST00000482771 YTHDC1Q96MU7 727 aaKnown RBP14.53□□□□□ -0.08
TMEM54-206ENST00000482771 NECTIN4Q96NY8 510 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 SMOC2Q9H3U7 446 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 BRPF3Q9ULD4 1205 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 PCDHA10Q9Y5I2 948 aa14.53□□□□□ -0.08
TMEM54-206ENST00000482771 PROB1E7EW31 1015 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ZBTB43O43298 467 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ASGR2P07307 311 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 TMOD1P28289 359 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ALDH7A1P49419 539 aaKnown RBP14.52□□□□□ -0.09
TMEM54-206ENST00000482771 BMS1Q14692 1282 aaKnown RBP14.52□□□□□ -0.09
TMEM54-206ENST00000482771 CLLU1OSQ5K130 101 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ATAT1Q5SQI0 421 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 RARS2Q5T160 578 aaKnown RBP14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ZNF746Q6NUN9 644 aaPredicted RBP14.52□□□□□ -0.09
TMEM54-206ENST00000482771 KANK3Q6NY19 840 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ASCL5Q7RTU5 278 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 SLC39A11Q8N1S5 342 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 LRRC71Q8N4P6 559 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 TMEM105Q8N8V8 129 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 TMEM87AQ8NBN3 555 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 HELQQ8TDG4 1101 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 TCEANC2Q96MN5 208 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 MAP7D2Q96T17 732 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 ESYT1Q9BSJ8 1104 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 NRBP2Q9NSY0 501 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 CEP131Q9UPN4 1083 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 SAMM50Q9Y512 469 aa14.52□□□□□ -0.09
TMEM54-206ENST00000482771 A0A0U1RQF3 1178 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 hCG_1984214I3L0E3 225 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 ADAMTS3O15072 1205 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 EOMESO95936 686 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 FGFR4P22455 802 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 MTHFRP42898 656 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 METAP2P50579 478 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMEM54-206ENST00000482771 EXOSC10Q01780 885 aaKnown RBP14.51□□□□□ -0.09
TMEM54-206ENST00000482771 SMAP1Q8IYB5 467 aaPredicted RBP14.51□□□□□ -0.09
TMEM54-206ENST00000482771 ZNF713Q8N859 430 aaPredicted RBP14.51□□□□□ -0.09
TMEM54-206ENST00000482771 CRYGNQ8WXF5 182 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 FAM217BQ9NTX9 383 aaPredicted RBP14.51□□□□□ -0.09
TMEM54-206ENST00000482771 TCEAL9Q9UHQ7 104 aa14.51□□□□□ -0.09
TMEM54-206ENST00000482771 KMT2EQ8IZD2 1858 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 CSDE1O75534 798 aaKnown RBP14.5□□□□□ -0.09
TMEM54-206ENST00000482771 CDC27P30260 824 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 BCAR1P56945 870 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 PRR16Q569H4 304 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 ASTLQ6HA08 431 aaPredicted RBP14.5□□□□□ -0.09
TMEM54-206ENST00000482771 DHX32Q7L7V1 743 aaKnown RBP14.5□□□□□ -0.09
TMEM54-206ENST00000482771 ZNF598Q86UK7 904 aaKnown RBP14.5□□□□□ -0.09
TMEM54-206ENST00000482771 VPS52Q8N1B4 723 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 ZNF710Q8N1W2 664 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 LINC01465Q8N7H1 131 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 AUTS2Q8WXX7 1259 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 FAM167AQ96KS9 214 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 SCLT1Q96NL6 688 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 ANO2Q9NQ90 1003 aa14.5□□□□□ -0.09
TMEM54-206ENST00000482771 NAP1L2Q9ULW6 460 aaPredicted RBP14.5□□□□□ -0.09
TMEM54-206ENST00000482771 EP300Q09472 2414 aaPredicted RBP14.49□□□□□ -0.09
TMEM54-206ENST00000482771 GOLGA8AA7E2F4 631 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 DARSP14868 501 aaKnown RBP14.49□□□□□ -0.09
TMEM54-206ENST00000482771 ADD1P35611 737 aaKnown RBP14.49□□□□□ -0.09
TMEM54-206ENST00000482771 GPC3P51654 580 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 PFKFB3Q16875 520 aaPredicted RBP14.49□□□□□ -0.09
TMEM54-206ENST00000482771 ZDHHC14Q8IZN3 488 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 PLCD3Q8N3E9 789 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 NLRP7Q8WX94 980 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 TMEM169Q96HH4 297 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 MFSD1Q9H3U5 465 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 DACT1Q9NYF0 836 aa14.49□□□□□ -0.09
TMEM54-206ENST00000482771 DBR1Q9UK59 544 aaKnown RBP14.49□□□□□ -0.09
TMEM54-206ENST00000482771 MYO15AQ9UKN7 3530 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 KLF18A0A0U1RQI7 1052 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.48□□□□□ -0.09
TMEM54-206ENST00000482771 ZNF862O60290 1169 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 EPCAMP16422 314 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 NBL1P41271 181 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 CLCN5P51795 746 aa14.48□□□□□ -0.09
TMEM54-206ENST00000482771 SETQ01105 290 aaPredicted RBP14.48□□□□□ -0.09
TMEM54-206ENST00000482771 FOXK2Q01167 660 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms