RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 QARSP47897 775 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 GATMP50440 423 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 NEK4P51957 841 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 TBC1D8BQ0IIM8 1120 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 EPHA7Q15375 998 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 LETM2Q2VYF4 491 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 FAM102BQ5T8I3 360 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 PIK3AP1Q6ZUJ8 805 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 TRMT1LQ7Z2T5 733 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 ZNF598Q86UK7 904 aaKnown RBP10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 LRRC71Q8N4P6 559 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 MAP7D2Q96T17 732 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 KIF2CQ99661 725 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 WRAP73Q9P2S5 460 aaPredicted RBP10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 PPME1Q9Y570 386 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 NLRC5Q86WI3 1866 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 XIRP2A4UGR9 3374 aa10.93□□□□□ -0.66
TMEM39A-207ENST00000482162 A0A0U1RQF3 1178 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 DENND3A2RUS2 1198 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 TMEM150BA6NC51 233 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 P4HBP07237 508 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 KCNA5P22460 613 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 UBE3AQ05086 875 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 HYAL1Q12794 435 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 NR5A1Q13285 461 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 PUS10Q3MIT2 529 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 FAM178BQ8IXR5 827 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 C4orf19Q8IY42 314 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 KLHL23Q8NBE8 558 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 IL27Q8NEV9 243 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 MTMR9Q96QG7 549 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 HSD17B14Q9BPX1 270 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 DHX33Q9H6R0 707 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 ALG13Q9NP73 1137 aaKnown RBP10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 CD320Q9NPF0 282 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 CYP26B1Q9NR63 512 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 CHST12Q9NRB3 414 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 AKT3Q9Y243 479 aa10.92□□□□□ -0.66
TMEM39A-207ENST00000482162 DDX11L8A8MPP1 907 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 BTBD18B2RXH4 712 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 CCNT1O60563 726 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 JAK2O60674 1132 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 DKC1O60832 514 aaKnown RBP eCLIP10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ZNF623O75123 536 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 LYPLA2O95372 231 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 EOMESO95936 686 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ATF7P17544 494 aaPredicted RBP10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 COL9A1P20849 921 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 KRT2P35908 639 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ADAM15Q13444 863 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 LRRC55Q6ZSA7 311 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ZNF410Q86VK4 478 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ECHDC2Q86YB7 292 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 SLFN12Q8IYM2 578 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 CASD1Q96PB1 797 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 TMEM117Q9H0C3 514 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 CWH43Q9H720 699 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 ATP6V0A4Q9HBG4 840 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 LRFN2Q9ULH4 789 aa10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 FNDC1Q4ZHG4 1894 aaPredicted RBP10.91□□□□□ -0.66
TMEM39A-207ENST00000482162 WNT7AO00755 349 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 SLITRK3O94933 977 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 FGFR1P11362 822 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 DNM2P50570 870 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 NPEPPSP55786 919 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 PLCB3Q01970 1234 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 DLX2Q07687 328 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 CSPP1Q1MSJ5 1256 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 MTERF2Q49AM1 385 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 PAN2Q504Q3 1202 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 PTCRAQ6ISU1 281 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 EXOC8Q8IYI6 725 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 RSPH1Q8WYR4 309 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 PPP1R16BQ96T49 567 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 JPH2Q9BR39 696 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 SH2D3AQ9BRG2 576 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 LLPHQ9BRT6 129 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 GCOM2Q9BZD3 368 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 ZSWIM4Q9H7M6 989 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 TYW1Q9NV66 732 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 RGL1Q9NZL6 768 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 SEPT9Q9UHD8 586 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 LIMCH1Q9UPQ0 1083 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 LZTS1Q9Y250 596 aa10.9□□□□□ -0.66
TMEM39A-207ENST00000482162 ATG2AQ2TAZ0 1938 aa10.9□□□□□ -0.67
TMEM39A-207ENST00000482162 A0A087WZ62 844 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 C19orf67A6NJJ6 358 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 TBKBP1A7MCY6 615 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 FSCN2O14926 492 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 HOXA2O43364 376 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 CSDE1O75534 798 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 EYA4O95677 639 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 XRCC6P12956 609 aaKnown RBP eCLIP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 ZSCAN20P17040 1043 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 IRS1P35568 1242 aa10.89□□□□□ -0.67
TMEM39A-207ENST00000482162 RFC5P40937 340 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms