RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 HYIQ5T013 277 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 POTEGQ6S5H5 508 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 RHPN2Q8IUC4 686 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
CCDC78-212ENST00000482152 ZBED2Q9BTP6 218 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 TSPYL2Q9H2G4 693 aaPredicted RBP18.18■□□□□ 0.5
CCDC78-212ENST00000482152 C1orf112Q9NSG2 853 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 ST3GAL5Q9UNP4 418 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 INSL6Q9Y581 213 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 COL4A3BPQ9Y5P4 624 aa18.18■□□□□ 0.5
CCDC78-212ENST00000482152 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.17■□□□□ 0.5
CCDC78-212ENST00000482152 GRXCR1A8MXD5 290 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 TLL1O43897 1013 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 DEFB103AP81534 67 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 DRP2Q13474 957 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 TFDP1Q14186 410 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 PTPAQ15257 358 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.17■□□□□ 0.5
CCDC78-212ENST00000482152 SRGAP1Q7Z6B7 1085 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 TMEM40Q8WWA1 233 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 SLC28A3Q9HAS3 691 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 DDX19AQ9NUU7 478 aaKnown RBP18.17■□□□□ 0.5
CCDC78-212ENST00000482152 DAXXQ9UER7 740 aaPredicted RBP18.17■□□□□ 0.5
CCDC78-212ENST00000482152 SRPRBQ9Y5M8 271 aaKnown RBP18.17■□□□□ 0.5
CCDC78-212ENST00000482152 CLIC4Q9Y696 253 aa18.17■□□□□ 0.5
CCDC78-212ENST00000482152 TET1Q8NFU7 2136 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 A0A087WZ62 844 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 EYA4O95677 639 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 STAG3L1P0CL83 205 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 ZSCAN20P17040 1043 aaPredicted RBP18.16■□□□□ 0.5
CCDC78-212ENST00000482152 CYP11B2P19099 503 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 SFPQP23246 707 aaKnown RBP eCLIP18.16■□□□□ 0.5
CCDC78-212ENST00000482152 ARL2P36404 184 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 UBA7P41226 1012 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 LAMTOR4Q0VGL1 99 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 SLC39A14Q15043 492 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 FAM228AQ86W67 206 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 DEFB123Q8N688 67 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 FDXACB1Q9BRP7 624 aaPredicted RBP18.16■□□□□ 0.5
CCDC78-212ENST00000482152 MMTAG2Q9BU76 263 aaKnown RBP18.16■□□□□ 0.5
CCDC78-212ENST00000482152 SEMA6BQ9H3T3 888 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 XPNPEP1Q9NQW7 623 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 CHST12Q9NRB3 414 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 RGS18Q9NS28 235 aa18.16■□□□□ 0.5
CCDC78-212ENST00000482152 DENND3A2RUS2 1198 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 PBX2P40425 430 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 NASPP49321 788 aaPredicted RBP18.15■□□□□ 0.5
CCDC78-212ENST00000482152 RABGGTBP53611 331 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 ECM1Q16610 540 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 PADI6Q6TGC4 694 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 SLC24A5Q71RS6 500 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 CABP7Q86V35 215 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 SPRYD3Q8NCJ5 442 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 CALML4Q96GE6 196 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 CDK5RAP3Q96JB5 506 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 NLRP4Q96MN2 994 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 PPP1R16BQ96T49 567 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 TIPINQ9BVW5 301 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 NFKBIZQ9BYH8 718 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 BHMT2Q9H2M3 363 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 TMX1Q9H3N1 280 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 ZNF576Q9H609 170 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 EVPLQ92817 2033 aa18.15■□□□□ 0.5
CCDC78-212ENST00000482152 PP2D1A8MPX8 630 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 USO1O60763 962 aaKnown RBP18.14■□□□□ 0.49
CCDC78-212ENST00000482152 F13A1P00488 732 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 SRGAP2CP0DJJ0 459 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 CDC25AP30304 524 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 PHKA2P46019 1235 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 HTRA4P83105 476 aaPredicted RBP18.14■□□□□ 0.49
CCDC78-212ENST00000482152 FAM173BQ6P4H8 233 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 RTN4RL1Q86UN2 441 aaPredicted RBP18.14■□□□□ 0.49
CCDC78-212ENST00000482152 IFNLR1Q8IU57 520 aaPredicted RBP18.14■□□□□ 0.49
CCDC78-212ENST00000482152 NPAS4Q8IUM7 802 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 USP28Q96RU2 1077 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 CCSER1Q9C0I3 900 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 IFT122Q9HBG6 1241 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 DACT1Q9NYF0 836 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 KCND2Q9NZV8 630 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 KCNG1Q9UIX4 513 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 CFAP45Q9UL16 551 aa18.14■□□□□ 0.49
CCDC78-212ENST00000482152 A0A087WWV3 80 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 PPP6R2O75170 966 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 YEATS4O95619 227 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 SARSP49591 514 aaKnown RBP18.13■□□□□ 0.49
CCDC78-212ENST00000482152 FAM189BP81408 668 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 NCBP1Q09161 790 aaKnown RBP18.13■□□□□ 0.49
CCDC78-212ENST00000482152 DSC3Q14574 896 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 KSR1Q8IVT5 923 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
CCDC78-212ENST00000482152 RNF149Q8NC42 400 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 KIFAP3Q92845 792 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 ADAM2Q99965 735 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 TRAIPQ9BWF2 469 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 ELAC1Q9H777 363 aaKnown RBP18.13■□□□□ 0.49
CCDC78-212ENST00000482152 MTMR10Q9NXD2 777 aa18.13■□□□□ 0.49
CCDC78-212ENST00000482152 YBX2Q9Y2T7 364 aaKnown RBP18.13■□□□□ 0.49
CCDC78-212ENST00000482152 LAMA3Q16787 3333 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms