RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 SLFN13Q68D06 897 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 CATSPERGQ6ZRH7 1159 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 STOX1Q6ZVD7 989 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 RUFY3Q7L099 469 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 CATIPQ7Z7H3 387 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 DNAJC5GQ8N7S2 189 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 TMEM47Q9BQJ4 181 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 DUSP23Q9BVJ7 150 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 BACH2Q9BYV9 841 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 INCENPQ9NQS7 918 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 HOXC10Q9NYD6 342 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 FEM1BQ9UK73 627 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 PNMA2Q9UL42 364 aa7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 CTDP1Q9Y5B0 961 aaPredicted RBP7.79□□□□□ -1.16
CTNNB1-213ENST00000482042 SMCHD1A6NHR9 2005 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 KIAA1217Q5T5P2 1943 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 A0A1W2PRG0 241 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 ANKRD33BA6NCL7 494 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 BTBD19C9JJ37 291 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 PDHXO00330 501 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 FANCGO15287 622 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 DDAH1O94760 285 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 PDIA4P13667 645 aaKnown RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 VCAM1P19320 739 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 RPS6KB1P23443 525 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 KIF5BP33176 963 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 SLC1A4P43007 532 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 GNAQP50148 359 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 STAT2P52630 851 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 RCAN1P53805 252 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 TRAF1Q13077 416 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 COG2Q14746 738 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 SEC23AQ15436 765 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 ASPRV1Q53RT3 343 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 PPM1JQ5JR12 505 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 LBX2Q6XYB7 198 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 CYB5R4Q7L1T6 521 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 CCDC84Q86UT8 332 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 SGMS1Q86VZ5 419 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 MB21D1Q8N884 522 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 ENAHQ8N8S7 591 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 PRPF38AQ8NAV1 312 aaKnown RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 FLCNQ8NFG4 579 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 CTCFLQ8NI51 663 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 ACER1Q8TDN7 264 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 SMCR8Q8TEV9 937 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 BRI3BPQ8WY22 251 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 TANGO6Q9C0B7 1094 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 ALDH8A1Q9H2A2 487 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 RPAP3Q9H6T3 665 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 PAK6Q9NQU5 681 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
CTNNB1-213ENST00000482042 BAZ2BQ9UIF8 2168 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 CCDC196A0A1B0GTZ2 297 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 DCDC2CA8MYV0 355 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SH2B2O14492 632 aaPredicted RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 LEFTY1O75610 366 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 NDUFB10O96000 172 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 PARP1P09874 1014 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SMARCA1P28370 1054 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 COPB2P35606 906 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 EXOSC10Q01780 885 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 IKQ13123 557 aaPredicted RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 MOGSQ13724 837 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 KIF22Q14807 665 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 CCDC96Q2M329 555 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SHROOM1Q2M3G4 852 aaPredicted RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 ADCK5Q3MIX3 580 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 ZBTB37Q5TC79 503 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 CBLL1Q75N03 491 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 WFDC3Q8IUB2 231 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SIAH1Q8IUQ4 282 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 LRRC47Q8N1G4 583 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 FAM43AQ8N2R8 423 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 AGBL5Q8NDL9 886 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 IGDCC4Q8TDY8 1250 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 BCL7CQ8WUZ0 217 aaPredicted RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 GAL3ST3Q96A11 431 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 MISP3Q96FF7 219 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 LZTS2Q9BRK4 669 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 AGXT2Q9BYV1 514 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SSU72Q9NP77 194 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 RBM28Q9NW13 759 aaKnown RBP7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 PCDHA4Q9UN74 947 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 SLC12A7Q9Y666 1083 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 AK5Q9Y6K8 562 aa7.77□□□□□ -1.17
CTNNB1-213ENST00000482042 IGF2BP3O00425 579 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 NMT2O60551 498 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 TLR2O60603 784 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 ZBED4O75132 1171 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 FLOT1O75955 427 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 SNHG28P0DPA3 235 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 PDHBP11177 359 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 OAZ1P54368 228 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 ANTXR2P58335 489 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 CCNA1P78396 465 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 RABEP1Q15276 862 aa7.76□□□□□ -1.17
CTNNB1-213ENST00000482042 TREML2Q5T2D2 321 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms