RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 ARVCFO00192 962 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 MAGEB2O15479 319 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 MAFO75444 373 aaPredicted RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 COL6A1P12109 1028 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 CYP11B2P19099 503 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 PTPN11Q06124 597 aaPredicted RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 HIC1Q14526 733 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 GDF6Q6KF10 455 aaPredicted RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 EFCAB12Q6NXP0 572 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 SLC39A5Q6ZMH5 540 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 DYMQ7RTS9 669 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 NECAB2Q7Z6G3 386 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 GRAMD1CQ8IYS0 662 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 TNS4Q8IZW8 715 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 METTL13Q8N6R0 699 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 MTRQ99707 1265 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 SEZ6LQ9BYH1 1024 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 DHX33Q9H6R0 707 aaKnown RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 ATP6V0A4Q9HBG4 840 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 BRCA2P51587 3418 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 MYMKA6NI61 221 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 CCDC85CA6NKD9 419 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 TREHO43280 583 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 C22orf31O95567 290 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 HOXC8P31273 242 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 ADAM17P78536 824 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 EMC2Q15006 297 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 CAMK4Q16566 473 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 PTGISQ16647 500 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 ARSHQ5FYA8 562 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 SLC43A3Q8NBI5 491 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 DDX12PQ92771 950 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 BLZF1Q9H2G9 400 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 POLD4Q9HCU8 107 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 HOOK1Q9UJC3 728 aaKnown RBP12.84□□□□□ -0.35
HPS4-212ENST00000481910 NOD1Q9Y239 953 aa12.84□□□□□ -0.35
HPS4-212ENST00000481910 NPHP3-ACAD11A0A0J9YXS1 232 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 MBLAC1A4D2B0 266 aaPredicted RBP12.83□□□□□ -0.36
HPS4-212ENST00000481910 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
HPS4-212ENST00000481910 CDK7P50613 346 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 LRRC71Q8N4P6 559 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 MCPH1Q8NEM0 835 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 TRIM9Q9C026 710 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 PDLIM7Q9NR12 457 aa12.83□□□□□ -0.36
HPS4-212ENST00000481910 IGKV6-21A0A0C4DH24 114 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 CYP2C9P11712 490 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 GUCY2CP25092 1073 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 TMOD1P28289 359 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 CASP1P29466 404 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 DNM2P50570 870 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 SOX10P56693 466 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 GIT2Q14161 759 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 POSTNQ15063 836 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 SKOR2Q2VWA4 1001 aaPredicted RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 FAM102BQ5T8I3 360 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 TMEM143Q96AN5 459 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 REEP2Q9BRK0 252 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 CCDC94Q9BW85 323 aaPredicted RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 XPNPEP1Q9NQW7 623 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 TRMT13Q9NUP7 481 aaKnown RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 WDR70Q9NW82 654 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 PCDHA2Q9Y5H9 948 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 GAS2O43903 313 aaKnown RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 B4GALT4O60513 344 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 HIP1RO75146 1068 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 MYL1P05976 194 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 IDEP14735 1019 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 CLCN3P51790 818 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 PNOCQ13519 176 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 CUL4BQ13620 913 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 KLHL40Q2TBA0 621 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 ELOA2Q8IYF1 753 aaPredicted RBP12.82□□□□□ -0.36
HPS4-212ENST00000481910 TCP11Q8WWU5 503 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 TIPINQ9BVW5 301 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 TRPV6Q9H1D0 765 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 NUP62CLQ9H1M0 184 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 ZHX3Q9H4I2 956 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 GPRC5CQ9NQ84 441 aa12.82□□□□□ -0.36
HPS4-212ENST00000481910 MROH7Q68CQ1 1323 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 MYH11P35749 1972 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 SMIM35A0A1B0GVV1 85 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 TRAK2O60296 914 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 PRR29P0C7W0 189 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 ASIC1P78348 528 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 DRP2Q13474 957 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 C1orf53Q5VUE5 145 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 IER5Q5VY09 327 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 TAF2Q6P1X5 1199 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 RUFY4Q6ZNE9 571 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 FAM126BQ8IXS8 530 aa12.81□□□□□ -0.36
HPS4-212ENST00000481910 DNAJB3Q8WWF6 145 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms