RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 WDR72Q3MJ13 1102 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 HSP90AA5PQ58FG0 334 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 BEND3Q5T5X7 828 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 FYB2Q5VWT5 728 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 FBXO31Q5XUX0 539 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 RNF43Q68DV7 783 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 CCBE1Q6UXH8 406 aaPredicted RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 OSCARQ8IYS5 282 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 PI4K2BQ8TCG2 481 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 B3GNT4Q9C0J1 378 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 TUT1Q9H6E5 874 aaKnown RBP11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 HYOU1Q9Y4L1 999 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 AGLP35573 1532 aa11.13□□□□□ -0.63
PRPF4B-206ENST00000481109 LINC00854A0A1B0GVQ3 168 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 FUOMA2VDF0 154 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 TEX33O43247 280 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 B3GALNT1O75752 331 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 UBTFL6P0CB48 400 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PTH1RQ03431 593 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 GIT2Q14161 759 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 CYTH1Q15438 398 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 NT5DC1Q5TFE4 455 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 DHRS4L2Q6PKH6 230 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 SIX5Q8N196 739 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PIP4K2CQ8TBX8 421 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PYROXD1Q8WU10 500 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 NMD3Q96D46 503 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 CEP63Q96MT8 703 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 C12orf10Q9HB07 376 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PLGRKTQ9HBL7 147 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 EPB41L5Q9HCM4 733 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 GID8Q9NWU2 228 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 UMODL1Q5DID0 1318 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 A0A1W2PQ67 120 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 TRAFD1O14545 582 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 FARP2O94887 1054 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 HEXIM1O94992 359 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 THOP1P52888 689 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PPP4CP60510 307 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 HERVK_113P62684 666 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 CUL1Q13616 776 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 KRT24Q2M2I5 525 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 SPDYAQ5MJ70 313 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 SAMD14Q8IZD0 417 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PTCD2Q8WV60 388 aaKnown RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 CPLX3Q8WVH0 158 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 EME1Q96AY2 570 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 NEURL2Q9BR09 285 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 TLE6Q9H808 572 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 GPHNQ9NQX3 736 aaPredicted RBP11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 SELENONQ9NZV5 590 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 TELO2Q9Y4R8 837 aa11.12□□□□□ -0.63
PRPF4B-206ENST00000481109 HAT1O14929 419 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 FOXD2O60548 495 aaPredicted RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CNOT3O75175 753 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 SHBGP04278 402 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ZCCHC18P0CG32 403 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 PABPC1P11940 636 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CHN1P15882 459 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 RXRAP19793 462 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 BCAP31P51572 246 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CCR3P51677 355 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ACVR2BQ13705 512 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 LPIN1Q14693 890 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 UAP1Q16222 522 aaPredicted RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 PDXDC1Q6P996 788 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 C1orf228Q6PIY5 440 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CCDC81Q6ZN84 652 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ARHGEF18Q6ZSZ5 1173 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 FITM2Q8N6M3 262 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 TOR1AIP2Q8NFQ8 470 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 NKX2-3Q8TAU0 364 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 DNAJC1Q96KC8 554 aaKnown RBP11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 CTRCQ99895 268 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ERP44Q9BS26 406 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 USP29Q9HBJ7 922 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 DSEQ9UL01 958 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 VILLO15195 856 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ZNF12P17014 697 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 BMP6P22004 513 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 RASSF2P50749 326 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 AP3M2P53677 418 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 NAA20P61599 178 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 COX10Q12887 443 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 PRKG1Q13976 671 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 DPYSQ14117 519 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 HLTFQ14527 1009 aaKnown RBP eCLIP11.11□□□□□ -0.631e-6■■□□□ 13.1
PRPF4B-206ENST00000481109 TGFBIQ15582 683 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 TMTC3Q6ZXV5 915 aa11.11□□□□□ -0.63
PRPF4B-206ENST00000481109 ACAD11Q709F0 780 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms