RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 ZNF277Q9NRM2 450 aaPredicted RBP8.73□□□□□ -1.01
CBX3-206ENST00000481057 PCDHA9Q9Y5H5 950 aa8.73□□□□□ -1.01
CBX3-206ENST00000481057 USP42Q9H9J4 1324 aaKnown RBP8.73□□□□□ -1.01
CBX3-206ENST00000481057 ZC3H12DA2A288 527 aaKnown RBP8.72□□□□□ -1.01
CBX3-206ENST00000481057 ABLIM1O14639 778 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 RFPL3O75679 317 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 SLC6A11P48066 632 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 PLEKHG4Q58EX7 1191 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 FGD2Q7Z6J4 655 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 KIAA0907Q7Z7F0 614 aaPredicted RBP8.72□□□□□ -1.01
CBX3-206ENST00000481057 DCP2Q8IU60 420 aaKnown RBP8.72□□□□□ -1.01
CBX3-206ENST00000481057 MAFAQ8NHW3 353 aaPredicted RBP8.72□□□□□ -1.01
CBX3-206ENST00000481057 SCLYQ96I15 445 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 FEZ1Q99689 392 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 EPB41L1Q9H4G0 881 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 NUDT5Q9UKK9 219 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 PTPN22Q9Y2R2 807 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 PCDHA8Q9Y5H6 950 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 IRS2Q9Y4H2 1338 aa8.72□□□□□ -1.01
CBX3-206ENST00000481057 ADGRB1O14514 1584 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 F8W031 263 aaPredicted RBP8.71□□□□□ -1.02
CBX3-206ENST00000481057 RASGRP1O95267 797 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 PAK1Q13153 545 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 PABPC4Q13310 644 aaKnown RBP eCLIP8.71□□□□□ -1.021e-28■■□□□ 12.4
CBX3-206ENST00000481057 OLFML2BQ68BL8 750 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 LTV1Q96GA3 475 aaPredicted RBP8.71□□□□□ -1.02
CBX3-206ENST00000481057 PEX11GQ96HA9 241 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 ZNF333Q96JL9 665 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 JAM3Q9BX67 310 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 IPPKQ9H8X2 491 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 KCNK12Q9HB15 430 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 GBA2Q9HCG7 927 aaPredicted RBP8.71□□□□□ -1.02
CBX3-206ENST00000481057 ASAP1Q9ULH1 1129 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 SIT1Q9Y3P8 196 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 HCFC2Q9Y5Z7 792 aa8.71□□□□□ -1.02
CBX3-206ENST00000481057 ITGB4P16144 1822 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 UNC79Q9P2D8 2635 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 FAM47E-STBD1D6RA91 191 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 WNT9AO14904 365 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 PEX10O60683 326 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 DGKIO75912 1065 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 SERPINB2P05120 415 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 VIPR1P32241 457 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 ZC3H14Q6PJT7 736 aaKnown RBP8.7□□□□□ -1.02
CBX3-206ENST00000481057 TMC6Q7Z403 805 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 C2orf69Q8N8R5 385 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 PCDH19Q8TAB3 1148 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 MAGEB10Q96LZ2 347 aaPredicted RBP8.7□□□□□ -1.02
CBX3-206ENST00000481057 HTATIP2Q9BUP3 242 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 PGAP2Q9UHJ9 254 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 DBR1Q9UK59 544 aaKnown RBP8.7□□□□□ -1.02
CBX3-206ENST00000481057 RNF114Q9Y508 228 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 AFDNP55196 1824 aaKnown RBP8.7□□□□□ -1.02
CBX3-206ENST00000481057 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
CBX3-206ENST00000481057 CHD8Q9HCK8 2581 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 CACNA1BQ00975 2339 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 MYOCOSA0A1B0GUC4 107 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 PAX4O43316 350 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 SMARCA5O60264 1052 aaPredicted RBP8.69□□□□□ -1.02
CBX3-206ENST00000481057 HSD3B2P26439 372 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 PRR5P85299 388 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 EMC4Q5J8M3 183 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 DLK2Q6UY11 383 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 FBXO15Q8NCQ5 510 aaPredicted RBP8.69□□□□□ -1.02
CBX3-206ENST00000481057 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.69□□□□□ -1.02
CBX3-206ENST00000481057 SEC14L1Q92503 715 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 TSPAN17Q96FV3 270 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 AP5M1Q9H0R1 490 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 R3HDMLQ9H3Y0 253 aa8.69□□□□□ -1.02
CBX3-206ENST00000481057 ADARB2Q9NS39 739 aaKnown RBP8.69□□□□□ -1.02
CBX3-206ENST00000481057 TCRBV16S1A1N1A0A5B0 115 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 SGSM2O43147 1006 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 DNAJC8O75937 253 aaPredicted RBP8.68□□□□□ -1.02
CBX3-206ENST00000481057 NFIXQ14938 502 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 KCNJ15Q99712 375 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 LRFN3Q9BTN0 628 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 TTC21BQ7Z4L5 1316 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 NCOR1O75376 2440 aa8.68□□□□□ -1.02
CBX3-206ENST00000481057 BDP1A6H8Y1 2624 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 KRT37O76014 449 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 IARSP41252 1262 aaKnown RBP8.67□□□□□ -1.02
CBX3-206ENST00000481057 SRSF3P84103 164 aaKnown RBP8.67□□□□□ -1.02
CBX3-206ENST00000481057 MESP2Q0VG99 397 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 SLC9A5Q14940 896 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 C21orf62-AS1Q17RA5 79 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 STEAP3Q658P3 488 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 OTOP3Q7RTS5 596 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 MON2Q7Z3U7 1717 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 RASAL3Q86YV0 1011 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 ZC3H7AQ8IWR0 971 aaKnown RBP8.67□□□□□ -1.02
CBX3-206ENST00000481057 SLX4Q8IY92 1834 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 PIP4K2CQ8TBX8 421 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 JDP2Q8WYK2 163 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 NINJ1Q92982 152 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 PCDH11XQ9BZA7 1347 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 PCDH11YQ9BZA8 1340 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 NRXN2Q9P2S2 1712 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 PLAAQ9Y263 795 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
CBX3-206ENST00000481057 CGNL1Q0VF96 1302 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms